Job Description P77730 Confidence 99.78% Date Thu Jan 5 12:32:10 GMT 2012 Rank 207 Aligned Residues 350 % Identity 13% Template d1wyub1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Glycine dehydrogenase subunits (GDC-P) Resolution 2.10

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.				.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.																			.
Query SS confidence																																																						.	.	.																			.
Query Sequence		Y	I	F	D	M	L	Q	A	S	R	D	P	S	V	V	P	F	A	S	A	F	P	D	P	R	L	F	P	L	Q	Q	L	N	R	S	L	A	Q	V	S	K	T	A	T	A	M	S	V	I	E	N	L	.	.	.	P	P	G	N	A	E	L	R	Q	A	I	A	R	R	Y	A	L	Q	.	G	I	T	I	S	P
Query Conservation																																																						.	.	.																			.
Alig confidence																														.	.	.	.	.	.																			.	.	.																			.			.	.
Template Conservation																														.	.	.	.	.	.																																											.	.
Template Sequence		H	Y	T	G	L	S	R	R	Q	V	G	V	D	T	T	F	Y	P	L	G	S	C	T	M	K	Y	N	P	.	.	.	.	.	.	K	L	H	E	E	A	A	R	L	F	A	D	L	H	P	Y	Q	D	P	R	T	A	Q	G	A	L	R	L	M	W	E	L	G	E	Y	L	K	A	L	T	G	M	.	.	D	A
Template Known Secondary structure								T	T				T	T	T	S				B	T	T	T							.	.	.	.	.	.									T	T	S	S			T	T	S		G	G	G																				T		.	.	S
Template Predicted Secondary structure																														.	.	.	.	.	.																																											.	.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80							.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.			.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.									.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.
Query Sequence		D	E	I	V	I	T	A	G	A	L	E	A	L	N	L	S	L	Q	A	V	T	.	.	.	.	.	.	.	.	E	P	G	D	W	V	I	V	E	N	P	C	F	Y	G	A	L	Q	A	L	E	R	L	R	L	K	A	L	S	V	A	T	D	V	K	E	G	I	D	L	Q	A	L	E	L	A	L	Q	E	Y	P
Query Conservation																							.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	T	L	E	P	A	A	G	A	H	G	E	L	T	G	I	L	I	I	R	A	Y	H	E	D	R	G	E	G	R	T	R	R	V	V	L	V	P	D	S	A	H	G	S	N	P	A	T	A	S	M	A	G	Y	Q	V	R	E	I	P	S	G	P	E	G	E	V	D	L	E	A	L	K	R	E	L	G	P	H	V
Template Known Secondary structure							S	S																			T	T		T	T	T								T	T	S		T									T	T								B		T	T	S	S	B										S	T	T
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		V	K	A	C	W	L	M	T	N	S	Q	N	P	L	G	F	T	L	T	P	Q	K	K	A	Q	L	V	A	L	L	N	Q	Y	N	V	T	L	I	E	D	D	V	Y	S	E	L	Y	F	G	R	E	K	P	L	P	A	K	A	W	D	R	H	D	G	V	L	H	C	S	S	F	S	K	C	L	V	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence										.	.	.										.	.																																			.	.	.	.	.	.															.	.	.	.
Template Conservation										.	.	.										.	.																																			.	.	.	.	.	.
Template Sequence		A	A	L	M	L	T	N	P	.	.	.	N	T	L	G	L	F	E	R	R	.	.	I	L	E	I	S	R	L	C	K	E	A	G	V	Q	L	Y	Y	D	G	A	N	L	N	A	I	M	G	W	A	R	P	G	D	M	.	.	.	.	.	.	G	F	D	V	V	H	L	N	L	H	K	T	F	T	V	P	H	G
Template Known Secondary structure								S	S	.	.	.		T	T	S				T	T	.	.												T							G	G	G	G	G	G	T	T	T	T							.	.	.	.	.	.	T		S						T	T	T	T	T					T
Template Predicted Secondary structure										.	.	.										.	.																																			.	.	.	.	.	.
Template SS confidence
		205	.	.	.	.	210	.	.				.	.	.	.	.	.	.	220	.			.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.							.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
			316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.																				.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure		.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	P	G	F	R	I	G	W	V	A	A	G	K	H	A	R	K	I	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	Q	L	M	S	T	L	S	T	S	S	P	M	Q	L	A	L	V	D	Y	L	S	T	R	R	Y	D	A	H	L	R	R	L	R	R	Q	L	A	E	R	K
Query Conservation		.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	G	G	P	G	S	G	P	V	G	V	K	A	H	L	A	P	Y	L	P	V	P	L	V	E	R	G	E	E	G	F	Y	L	D	F	D	R	P	K	S	I	G	R	V	R	S	F	Y	G	N	F	L	A	L	V	R	A	W	A	Y	I	R	T	L	G	L	E	G	L	K	K	A	A	A	L	A	V	L	N	A
Template Known Secondary structure		T	S											G	G	G	G	G	G			S							S	S									T	T					S	S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400		.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.		.	.	.	450	.	.	.
Predicted Secondary structure																											.																																															.
Query SS confidence																											.																																															.
Query Sequence		Q	R	A	W	Q	A	L	L	R	Y	L	P	A	E	V	K	I	H	H	N	D	S	G	Y	F	.	L	W	L	E	L	P	E	P	L	D	A	G	E	L	S	L	A	A	L	T	H	H	I	S	I	A	P	G	K	M	F	S	T	G	E	N	W	S	R	F	F	R	F	N	T	A	.	W	Q	W	G	E	R	E
Query Conservation																											.																																															.
Alig confidence												.	.	.													.																															.	.	.														.
Template Conservation												.	.	.																																												.	.	.
Template Sequence		R	Y	L	K	E	L	L	K	E	K	.	.	.	G	Y	R	V	P	Y	D	G	P	S	M	H	E	F	V	A	Q	P	P	E	G	F	R	A	L	D	L	A	K	G	L	L	E	L	G	F	H	P	P	T	V	Y	F	.	.	.	P	L	I	V	K	E	A	L	M	V	E	P	T	E	T	E	A	K	E	T	L
Template Known Secondary structure											T	.	.	.	T		B		S	S		S	S			S					B		S	T	T													T	T							S		.	.	.	S	T	T	S	T	T								T	T	S
Template Predicted Secondary structure												.	.	.																																												.	.	.
Template SS confidence
		354	.	.	.	.	.	360	.	.	.				.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.				.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
		454	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	A	V	K	Q	L	G	K	L	I	Q	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	F	A	E	A	M	G	A	L	L	K	K
Template Known Secondary structure													T	S
Template Predicted Secondary structure
Template SS confidence
		428	.	430	.	.	.	.	.	.	.	.	.	440

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions