Job Description P77730 Confidence 99.88% Date Thu Jan 5 12:32:10 GMT 2012 Rank 169 Aligned Residues 304 % Identity 16% Template d1wyua1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Glycine dehydrogenase subunits (GDC-P) Resolution 2.10

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		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.					.	.	210	.	.	.
Predicted Secondary structure																																																			.																					.	.	.	.
Query SS confidence																																																			.																					.	.	.	.
Query Sequence		V	I	E	N	L	P	P	G	N	A	E	L	R	Q	A	I	A	R	R	Y	A	L	Q	G	I	T	I	S	P	D	E	I	V	I	T	A	G	A	L	E	A	L	N	L	S	L	Q	A	V	.	T	E	P	G	D	W	V	I	V	E	N	P	C	F	Y	G	A	L	Q	A	.	.	.	.	L	E	R	L	R	L
Query Conservation																																																			.																					.	.	.	.
Alig confidence																										.																									.																					.	.	.	.
Template Conservation																										.
Template Sequence		Y	Q	P	E	V	S	Q	G	V	L	Q	A	T	F	E	Y	Q	T	M	I	A	E	L	A	.	G	L	E	I	A	N	A	S	M	Y	D	G	A	T	A	L	A	E	G	V	L	L	A	L	R	E	T	G	R	M	G	V	L	V	S	Q	G	V	H	P	E	Y	R	A	V	L	R	A	Y	L	E	A	V	G	A
Template Known Secondary structure			S	G	G	G																				.	T	S	S				S		B	S	S																	T								T	T	S															T	T
Template Predicted Secondary structure																										.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	L	S	V	A	T	D	V	K	E	G	I	D	L	Q	A	L	E	L	A	L	Q	E	Y	P	V	K	A	C	W	L	M	T	N	S	Q	N	P	L	G	F	T	L	T	P	Q	K	K	A	Q	L	V	A	L	L	N	Q	Y	N	V	T	L	I	E	D	D	V	Y	S	E	L	Y	F	G	R	E	K	P	L
Query Conservation
Alig confidence											.									.	.	.	.	.													.	.									.	.	.																												.	.	.	.
Template Conservation											.									.	.	.	.	.													.	.									.	.	.																												.	.	.	.
Template Sequence		K	L	L	T	L	P	L	E	G	.	G	R	T	P	L	P	E	V	.	.	.	.	.	G	E	E	V	G	A	V	V	V	Q	N	P	.	.	N	F	L	G	A	L	E	D	.	.	.	L	G	P	F	A	E	A	A	H	G	A	G	A	L	F	V	A	V	A	D	P	L	S	L	G	V	L	.	.	.	.	K
Template Known Secondary structure									B	T	.	T	B							.	.	.	.	.		T	T								S	S	.	.		T	T	S	B				.	.	.											T	T									T	T	G	G	G	T	S	.	.	.	.
Template Predicted Secondary structure											.									.	.	.	.	.													.	.									.	.	.																												.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.						.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.				.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240					.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.																														330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure																								.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	A	K	A	W	D	R	H	D	G	V	L	H	C	S	S	F	S	K	C	L	V	.	P	G	F	R	I	G	W	V	A	A	G	K	H	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	K	I	Q	R	L	Q	L	M	S	T	L	S	T
Query Conservation																								.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	P	G	A	Y	G	A	D	I	A	V	G	D	G	Q	S	L	G	L	P	M	G	F	G	G	P	H	F	G	F	L	A	T	K	K	A	F	V	R	Q	L	P	G	R	L	V	S	E	T	V	D	V	E	G	R	R	G	F	I	L	T	L	Q	A	R	E	Q	Y	I	R	R	A	K	A	K	S	N	I	T	T
Template Known Secondary structure							T		S							T	T	T	T				G	G	G		S									G	G	G	G	G	G			S									T	T	S									G	G	G	S					G	G	G	S	S					S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	P	M	Q	L	A	L	V	D	Y	L	S	T	R	R	Y	D	A	H	L	R	R	L	R	R	Q	L	A	E	R	K	Q	R	A	W	Q	A	L	L	R	Y	L	P	A	E	V	K	I	H	H	N	D	S	G	Y	F	L	W	L	E	L	P	E	P	L	D	A	G	E	L	S	L	A	A	L	T	H	H	I
Query Conservation
Alig confidence																																												.	.																	.
Template Conservation																																												.	.																	.
Template Sequence		N	A	Q	L	T	A	L	M	G	A	M	Y	L	A	A	L	G	P	E	G	L	R	E	V	A	L	K	S	V	E	M	A	H	K	L	H	A	L	L	L	E	V	.	.	P	G	V	R	P	F	T	P	K	P	F	F	N	E	F	A	.	L	A	L	P	K	D	P	E	A	V	R	R	A	L	A	E	R	G	F
Template Known Secondary structure																																									T	T	S	.	.	T	T					S		S	S	B		S				.				S	S												T	T
Template Predicted Secondary structure																																												.	.																	.
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.			.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.		.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		S	I	A	P	G	K	M	F	S	T	G	E	N	W	S	R	F	F	R	F	N	T	A	.	W	Q	W	G	E	R	E	E	Q	A	V	K	Q	L	G	K	L	I
Query Conservation																									.
Alig confidence							.	.	.																.
Template Conservation							.	.	.
Template Sequence		H	G	A	T	P	.	.	.	V	P	R	E	Y	G	E	N	L	A	L	F	A	A	T	E	L	H	E	E	E	D	L	L	A	L	R	E	A	L	K	E	V	L
Template Known Secondary structure							.	.	.			T	T	S		S	S								T	T
Template Predicted Secondary structure							.	.	.
Template SS confidence
		399	400	.	.	.				.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions