Phyre 2 alignment of P77730 with d1v72a1

Job Description P77730
Confidence 99.97% Date Thu Jan 5 12:32:10 GMT 2012

Rank 89 Aligned Residues 335

% Identity 14% Template d1v72a1

SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like

Resolution 2.05

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence	D	P	S	V	V	P	F	A	S	A	F	P	D	P	R	L	F	P	L	Q	Q	L	N	R	S	L	A	Q	V	S	K	T	A	T	A	M	S	V	I	E	N	L	P	P	G	N	A	E	L	R	Q	A	I	A	R	R	Y	A	L	Q	G	I	T	I	S	P	D	E	I	V	I	T	A	G	A	L	E	A	L	N
Query Conservation
Alig confidence															.	.	.															.	.	.																										.	.	.	.	.	.
Template Conservation															.	.	.															.	.	.																										.	.	.	.	.	.
Template Sequence	R	P	P	A	L	G	F	S	S	D	N	I	A	G	.	.	.	A	S	P	E	V	A	Q	A	L	V	K	H	S	S	.	.	.	G	Q	A	G	P	Y	G	T	D	E	L	T	A	Q	V	K	R	K	F	C	E	I	F	E	R	.	.	.	.	.	.	D	V	E	V	F	L	V	P	T	G	T	A	A	N	A
Template Known Secondary structure						B		S		G	G	G			.	.	.												T	T	S	.	.	.	S				S	T	T		S															T	S	.	.	.	.	.	.								S
Template Predicted Secondary structure															.	.	.															.	.	.																										.	.	.	.	.	.
Template SS confidence
	6	.	.	.	10	.	.	.	.	.	.	.	.	.				20	.	.	.	.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.							.	60	.	.	.	.	.	.	.	.	.	70	.	.	.

	182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.				.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.						240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																									.	.	.																																			.	.	.	.	.
Query SS confidence																									.	.	.																																			.	.	.	.	.
Query Sequence	L	S	L	Q	A	V	T	E	P	G	D	W	V	I	V	E	N	P	C	F	Y	G	A	L	.	.	.	Q	A	L	E	R	L	R	L	K	A	L	S	V	A	T	D	V	K	E	G	I	D	L	Q	A	L	E	L	A	L	Q	E	Y	P	.	.	.	.	.	V	K	A	C	W	L	M	T	N	S	Q	N	P	L
Query Conservation																									.	.	.																																			.	.	.	.	.
Alig confidence																									.	.	.																																			.	.	.	.	.
Template Conservation
Template Sequence	L	C	L	S	A	M	T	P	P	W	G	N	I	Y	C	H	P	A	S	H	I	N	N	D	E	C	G	A	P	E	F	F	S	N	G	A	K	L	M	T	V	D	G	P	A	A	K	L	D	I	V	R	L	R	E	R	T	R	E	K	V	G	D	V	H	T	T	Q	P	A	C	V	S	I	T	Q	A	T	E	V
Template Known Secondary structure					T	S			T	T							T	T	S					S	S	T	T						T	T	S									G	G	G											T	T	S	S	T	T		T	T	S										S	S		T	T
Template Predicted Secondary structure
Template SS confidence
	74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.

	254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	G	F	T	L	T	P	Q	K	K	A	Q	L	V	A	L	L	N	Q	Y	N	V	T	L	I	E	D	D	V	Y	S	E	L	Y	F	G	R	E	K	P	L	P	A	K	A	W	D	R	H	D	G	V	L	H	C	S	S	F	S	K	C	L	V	P	G	F	R	I	G	W	V	A	A	G	K	H	A	R	K	I	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence	G	S	I	Y	T	L	D	E	I	E	A	I	G	D	V	C	K	S	S	S	L	G	L	H	M	D	G	S	R	F	A	N	A	L	V	S	L	G	C	S	P	A	E	M	T	W	K	A	G	V	D	A	L	S	F	G	A	T	K	N	G	V	L	A	A	E	A	I	V	L	F	N	T	S	L	A	T	E	M	S
Template Known Secondary structure	S																		T	T								T	T									T			T	T	T	T	T	G	G	G	T									G	G	G	T		S	S							S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
	154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.

	334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	R	L	Q	L	M	S	T	L	S	T	S	S	P	M	Q	L	A	L	V	D	Y	L	S	T	R	R	Y	D	A	H	L	R	R	L	R	R	Q	L	A	E	R	K	Q	R	A	W	Q	A	L	L	R	Y	L	P	A	E	V	K	I	H	H	N	D	S	G	Y	F	L	W	L	E	L	P	E	P	L	D	A	G	E
Query Conservation
Alig confidence																													.	.																							.	.																					.	.	.	.	.
Template Conservation																													.	.																							.	.																					.	.	.	.	.
Template Sequence	Y	R	R	K	R	A	G	H	L	S	S	K	M	R	F	L	S	A	Q	I	D	A	Y	L	T	D	D	L	.	.	W	L	R	N	A	R	K	A	N	A	A	A	Q	R	L	A	Q	G	L	E	G	L	.	.	G	G	V	E	V	L	G	G	T	E	A	N	I	L	F	C	R	L	D	S	.	.	.	.	.	A
Template Known Secondary structure						T	T				S	S	T											T	S	T	T		.	.																				T	T		.	.	T	T					S				S	S									.	.	.	.	.
Template Predicted Secondary structure																													.	.																							.	.																					.	.	.	.	.
Template SS confidence
	234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.			.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.						.

	414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.		.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence	L	S	L	A	A	L	T	H	H	I	S	I	A	P	G	K	M	F	S	T	G	E	N	W	S	R	F	F	R	F	N	T	A	.	W	Q	W	G	E	R	E	E	Q	A	V	K	Q	L	G	K	L
Query Conservation																																		.
Alig confidence																			.	.	.	.	.	.										.
Template Conservation																			.	.	.	.	.	.
Template Sequence	M	I	D	A	L	L	K	A	G	F	G	F	Y	H	D	R	W	G	.	.	.	.	.	.	P	N	V	V	R	F	V	T	S	F	A	T	T	A	E	D	V	D	H	L	L	N	Q	V	R	L	A
Template Known Secondary structure								T	T		B		B		S	S	S	S	.	.	.	.	.	.	T	T								T	T																T
Template Predicted Secondary structure																			.	.	.	.	.	.
Template SS confidence
	305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.							.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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