Job Description P77730 Confidence 99.75% Date Thu Jan 5 12:32:10 GMT 2012 Rank 220 Aligned Residues 90 % Identity 31% Template d1v4ra1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain GntR-like transcriptional regulators Resolution UNK

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	Y	Q	Q	L	A	E	Q	L	R	E	Q	I	A	S	G	I	W	Q	P	G	D	R	L	P	S	L	R	D	Q	V	A	L	S	G	M	S	F	M	T	V	S	H	A	Y	Q	L	L	E	S	Q	G	Y	I	I	A	R	P	Q	S	G	Y	Y	V	A	P	Q	A	I	K	M	P	K	A	P	V	I	P	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	G	Y	A	D	V	A	T	H	F	R	T	L	I	K	S	G	E	L	A	P	G	D	T	L	P	S	V	A	D	I	R	A	Q	F	G	V	A	A	K	T	V	S	R	A	L	A	V	L	K	S	E	G	L	V	S	S	R	G	A	L	G	T	V	V	E	K	N	P	I	V	I	T	G	A	D	R	L	K	R
Template Known Secondary structure															T	T	T	T	S			T	T	S	B											S	S	S		T	T						T	T	T	T	T	T	S	S						T	T	T				S		S						S	S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	D	E	A	V	D	I	N	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	E	K	N	G	M	R	Y	A	P
Template Known Secondary structure		T	T	S							S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions