Job Description P77730 Confidence 99.96% Date Thu Jan 5 12:32:10 GMT 2012 Rank 95 Aligned Residues 380 % Identity 13% Template d1tpla_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases Resolution 2.30

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		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	K	M	P	K	A	P	V	I	P	V	T	R	D	E	A	V	D	I	N	T	Y	I	F	D	M	L	Q	A	S	R	D	P	S	V	V	P	F	A	S	A	F	P	D	P	R	L	F	P	L	Q	Q	L	N	R	S	L	A	Q	V	S	K	T	A	T	A	M	S	V	I	E	N	L	P	P	G	N	A	E
Query Conservation
Alig confidence																																		.
Template Conservation																																		.
Template Sequence		M	N	Y	P	A	E	P	F	R	I	K	S	V	E	T	V	S	M	I	P	R	D	E	R	L	K	K	M	Q	E	A	G	.	Y	N	T	F	L	L	N	S	K	D	I	Y	I	D	L	L	T	D	S	G	T	N	A	M	S	D	K	Q	W	A	G	M	M	M	G	D	E	A	Y	A	G	S	E	N	F	Y	H
Template Known Secondary structure				S				S	S																							T	T	.	T		G	G	G	S		G	G	G		S				S		S	S	S													T	T					S	S	S
Template Predicted Secondary structure																																		.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	Q	A	I	A	R	R	Y	A	L	Q	G	I	T	I	S	P	D	E	I	V	I	T	A	G	A	L	E	A	L	N	L	S	L	Q	A	V	T	E	P	G	D	W	V	I	V	E	N	P	C	F	Y	G	A	L	Q	A	L	E	R	L	R	L	K	A	L	S	V	A	T	D	V	K	E	G	I	D	L	Q
Query Conservation
Alig confidence													.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.
Template Sequence		L	E	R	T	V	Q	E	L	F	G	F	.	.	.	.	.	.	.	K	H	I	V	P	T	H	Q	G	R	G	A	E	N	L	L	S	Q	L	A	I	K	P	G	Q	Y	V	A	G	N	M	Y	K	N	G	A	V	F	V	D	I	V	R	D	E	A	H	D	A	G	L	N	I	A	F	K	G	D	I	D	L	K
Template Known Secondary structure													.	.	.	.	.	.	.	S						S	S															T	T						S					S	S						B		T	T	S	S		S	S				T	T	T	T		B
Template Predicted Secondary structure													.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90								.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		230	.	.	.	.	.	.	.	.	.	240				.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.											.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure													.	.	.																																											.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.																																											.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	E	L	A	L	Q	E	Y	P	V	.	.	.	K	A	C	W	L	M	T	N	S	Q	N	P	L	G	F	T	L	T	P	Q	K	K	A	Q	L	V	A	L	L	N	Q	Y	N	V	T	L	I	E	D	D	V	Y	.	.	.	.	.	.	.	.	.	.	S	E	L	Y	F	G	R	E	K	P	L	P	A	K
Query Conservation													.	.	.																																											.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.																																											.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	L	Q	K	L	I	D	E	K	G	A	E	N	I	A	Y	I	C	L	A	V	T	V	N	L	A	G	G	Q	P	V	S	M	A	N	M	R	A	V	R	E	L	T	A	A	H	G	I	K	V	F	Y	D	A	T	R	C	V	E	N	A	Y	F	I	K	E	Q	E	Q	G	F	E	N	K	S	I	A	E	I	V
Template Known Secondary structure												G	G	G								S	S	B		S	T	T		B																	T	T								T	T												S	T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.			.	.	.	370	.	.	.	.
Predicted Secondary structure																																																																								.	.
Query SS confidence																																																																								.	.
Query Sequence		A	W	D	R	H	D	G	V	L	H	C	S	S	F	S	K	C	L	V	P	G	F	R	I	G	W	V	A	A	G	K	H	A	R	K	I	Q	R	L	Q	L	M	S	T	L	S	T	S	S	P	M	Q	L	A	L	V	D	Y	L	S	T	R	R	Y	D	A	H	L	R	R	.	.	L	R	R	Q	L	A	E	R
Query Conservation																																																																								.	.
Alig confidence																																																																								.	.
Template Conservation
Template Sequence		H	E	M	F	S	Y	A	D	G	C	T	M	S	G	K	K	D	C	L	V	N	I	G	G	F	L	C	M	N	D	D	E	M	F	S	S	A	K	E	L	V	V	V	Y	E	G	M	P	S	Y	G	G	L	A	G	R	D	M	E	A	M	A	I	G	L	R	E	A	M	Q	Y	E	Y	I	E	H	R	V	K	Q
Template Known Secondary structure							T	S	S						T	T	T	T	T			S	S																								S	S			S	S	S																T	T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.									.	.	.	410	.	.	.	.	.	.	.	.	.	420	.		.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.																.
Query SS confidence																																		.	.	.	.	.	.	.	.																.
Query Sequence		K	Q	R	A	W	Q	A	L	L	R	Y	L	P	A	E	V	K	I	H	H	N	D	S	G	Y	F	L	W	L	E	L	P	.	.	.	.	.	.	.	.	E	P	L	D	A	G	E	L	S	L	A	A	L	T	H	.	H	I	S	I	A	P	G	K	M	F	S	T	G	E	N	W	S	R	F	F	R	F	N	T
Query Conservation																																		.	.	.	.	.	.	.	.																.
Alig confidence													.	.	.																			.	.	.	.	.	.	.	.																.											.	.	.	.	.	.
Template Conservation													.	.	.																																																					.	.	.	.	.	.
Template Sequence		V	R	Y	L	G	D	K	L	K	A	A	.	.	.	G	V	P	I	V	E	P	V	G	G	H	A	V	F	L	D	A	R	R	F	C	E	H	L	T	Q	D	E	F	P	A	Q	S	L	A	A	S	I	Y	V	E	T	G	V	R	S	M	E	R	G	I	K	.	.	.	.	.	.	L	E	T	V	R	L	T	I
Template Known Secondary structure											T	T	.	.	.	T			B		S	S			S	S										T	T	T	S		G	G	G															S										.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.																																																					.	.	.	.	.	.
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.				.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.							.	.	.	.	.	390	.	.
		446	.	.			.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		A	W	Q	.	.	W	G	E	R	E	E	Q	A	V	K	Q	L	G	K	L	I	Q	E
Query Conservation					.	.
Alig confidence					.	.
Template Conservation
Template Sequence		P	R	R	V	Y	T	Y	A	H	M	D	V	V	A	D	G	I	I	K	L	Y	Q	H
Template Known Secondary structure			T	T	S																		T	T
Template Predicted Secondary structure
Template SS confidence
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions