Job Description P77730 Confidence 99.89% Date Thu Jan 5 12:32:10 GMT 2012 Rank 162 Aligned Residues 344 % Identity 12% Template d1s0aa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.71

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		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		V	V	P	F	A	S	A	F	P	D	P	R	L	F	P	.	L	Q	Q	L	N	R	S	L	A	Q	V	S	K	T	A	T	A	M	S	V	I	E	N	L	P	P	G	N	A	E	L	R	Q	A	I	A	R	R	Y	A	L	Q	G	I	T	I	S	P	D	E	I	V	I	T	A	G	A	L	E	A	L	N	L	S
Query Conservation																	.
Alig confidence																	.																																								.	.	.	.	.
Template Conservation																																																									.	.	.	.	.
Template Sequence		L	V	D	G	M	S	S	W	W	A	A	I	H	G	Y	N	H	P	Q	L	N	A	A	M	K	S	Q	I	D	A	M	S	H	V	M	F	G	G	I	T	H	A	P	A	I	E	L	C	R	K	L	V	A	M	T	.	.	.	.	.	P	Q	P	L	E	C	V	F	L	A	D	S	G	S	V	A	V	E	V	A
Template Known Secondary structure					S	S	T	T	T	T	T		T	T		B	S																S					S	S																	S	.	.	.	.	.		T	T								S	S
Template Predicted Secondary structure																																																									.	.	.	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.						100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		184	.	.	.	.								.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.															.	.	.	.	.	.	220	.	.	.	.	.						.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Query Sequence		L	Q	A	V	T	.	.	.	.	.	.	.	E	P	G	D	W	V	I	V	E	N	P	C	F	Y	G	A	L	Q	A	L	E	R	L	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	L	S	V	A	T	D	V	K	E	G	.	.	.	.	.	I	D	L	Q	A	L	E	L	A	L	Q	E
Query Conservation							.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template Conservation
Template Sequence		M	K	M	A	L	Q	Y	W	Q	A	K	G	E	A	R	Q	R	F	L	T	F	R	N	G	Y	H	G	D	T	F	G	A	M	S	V	C	D	P	D	N	S	M	H	S	L	W	K	G	Y	L	P	E	N	L	F	A	P	A	P	Q	S	R	M	G	E	W	D	E	R	D	M	V	G	F	A	R	L	M	A	A
Template Known Secondary structure													T										T	T					S	S					T	T	S		T	T	T	T	T	G	G	G	G	T	T	T	S											S	B						G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		238	.	240	.	.			.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure							.	.																.
Query SS confidence							.	.																.
Query Sequence		Y	P	V	K	A	.	.	C	W	L	M	T	N	S	Q	N	P	L	G	F	T	L	.	T	P	Q	K	K	A	Q	L	V	A	L	L	N	Q	Y	N	V	T	L	I	E	D	D	V	Y	S	E	L	Y	F	G	R	E	K	P	L	P	A	K	A	W	D	R	H	D	G	V	L	H	C	S	S	F	S	K	C	L
Query Conservation							.	.																.
Alig confidence							.	.																.																																														.	.	.	.
Template Conservation																																																																						.	.	.	.
Template Sequence		H	R	H	E	I	A	A	V	I	I	E	P	I	V	Q	G	A	G	G	M	R	M	Y	H	P	E	W	L	K	R	I	R	K	I	C	D	R	E	G	I	L	L	I	A	D	E	I	A	T	G	F	G	R	T	G	K	L	F	A	C	E	H	A	E	I	A	P	D	.	.	.	.	I	L	C	L	G	A	L	T
Template Known Secondary structure			T	T	T								S	S				T	T	T				B		T														T								T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	G	G	T				S	.	.	.	.							T	T
Template Predicted Secondary structure																																																																						.	.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.					.	270	.	.	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.				.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																														.	.	.
Query SS confidence																														.	.	.
Query Sequence		V	P	G	F	R	I	G	W	V	A	A	G	K	H	A	R	K	I	Q	R	L	Q	L	M	S	T	L	S	.	.	.	T	S	S	P	M	Q	L	A	L	V	D	Y	L	S	T	R	R	Y	D	A	H	L	R	R	L	R	R	Q	L	A	E	R	K	Q	R	A	W	Q	A	L	L	R	Y	L	P	A	E	V	K
Query Conservation																														.	.	.
Alig confidence																														.	.	.																						.
Template Conservation																																																						.
Template Sequence		G	G	T	M	T	L	S	A	T	L	T	T	R	E	V	A	E	T	I	S	N	G	E	A	G	C	F	M	H	G	P	T	F	M	G	N	P	L	A	C	A	A	A	N	A	S	L	A	I	L	E	S	.	G	D	W	Q	Q	Q	V	A	D	I	E	V	Q	L	R	E	Q	L	A	P	A	R	D	A	E	M	V
Template Known Secondary structure		S	S	S	S																	T	S	T	T	S	S		S				T	T	T	T																	T	.																			G	G	G	G	G		T	T
Template Predicted Secondary structure																																																						.
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.		.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		I	H	H	N	D	S	G	Y	F	L	W	L	E	L	P	E	P	L	D	A	G	E	L	S	L	A	A	L	T	H	H	I	S	I	A	P	G	K	M	F	S	T	G	E	N	W	S	R	F	F	R	F	N	T	A	.	W	Q	W	G	E	R	E	E	Q	A	V	K	Q	L	G	K	L	I	Q	E	R
Query Conservation																																																									.
Alig confidence																																							.	.	.	.	.	.	.	.	.										.
Template Conservation																																							.	.	.	.	.	.	.	.	.
Template Sequence		A	D	V	R	V	L	G	A	I	G	V	V	E	T	T	H	P	V	N	M	A	A	L	Q	K	F	F	V	E	Q	G	V	W	I	R	P	F	.	.	.	.	.	.	.	.	.	G	K	L	I	Y	L	M	P	P	Y	I	I	L	P	Q	Q	L	Q	R	L	T	A	A	V	N	R	A	V	Q	D	E
Template Known Secondary structure								T	T							S	S		B												T	T						B	.	.	.	.	.	.	.	.	.	T	T								T	T																	T	S	S	G
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.										.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions