Return to main results Retrieve Phyre Job Id

Job DescriptionP77730
Confidence99.74%DateThu Jan 5 12:32:10 GMT 2012
Rank223Aligned Residues386
% Identity10%Templated1pmma_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases Pyridoxal-dependent decarboxylase
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   70.........80.........90.........100.........110.........120.........130.........140.........
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Query Sequence  AIKMPKAPVIPVTRDEAVDINTYIFDMLQASRDPSVVPFASAFPDPRLFPLQQLNRSLAQVSKTATAMSVIENLPPGNAE
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Template Sequence  GAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINK. . . NWIDKEEYPQSAA
Template Known Secondary structure  TSGGGSS



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GGGB
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TTT
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   1920.........30.........40.........50.........60.........70.........80.. .......90.....
 
   150.........160. ........170.. .......180....... ..190.........200.........210...
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Query Sequence  LRQAIARRYALQ. GITISPDEIVI. . . TAGALEALNLSLQAV. . . . . . . . . . . . TEPGDWVIVENPCFYGALQALERLRL
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Template Sequence  IDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDV
Template Known Secondary structure  TT



TTS

SSST


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   96...100.........110.........120.........130.........140.........150.........160.........170.....
 
   214.....220... ......230.........240.........250.........260.........270... ......280......
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Query Sequence  KALSVATDVK. EGIDLQALELALQEYPVKACWLMTNSQNPLGFTLTPQKKAQLVALLNQYN. . . . . . VTLIEDDVYSELY
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Template Sequence  ELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGV. . TYTGNYEF. . . PQPLHDALDKFQADTGIDIDMHIDAASGGFL
Template Known Secondary structure 


BTTB
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TTGGGT
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   176...180.........190.........200.........210. ........ 220.........230.........240.........250
 
   287..290.........300.........310.........320.........330......... 340.........350......
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Query Sequence  FGREKPLPAKAWDRHDGVLHCSSFSKCLVPGFRIGWVAAGKHARKIQRLQLMS. . . . . . . . . . TLSTSSPMQLALVDYLS
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Template Sequence  APFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYE
Template Known Secondary structure 
TT


STTSTTTTTTT


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SSGGGS
GGG
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   251........260.........270.........280.........290.........300.........310.........320.........330
 
   357..360 .........370.........380.........390..... ....400..... ....410.........420.......
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Query Sequence  TRRY. DAHLRRLRRQLAERKQRAWQALLRYLPAEVKIHHN. . . . DSGYFLWLEL. . . . PEPLDAGELSLAALTHHISIAP
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Template Sequence  FLRLGREGYTKVQNASYQVAAYLADEIAKL. . GPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQ. VP
Template Known Secondary structure  TT..S


TTTBSS
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   331........340.........350.........360 .........370.........380.........390.........400..... ..
 
   428.430.........440..... ....450.........460......
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Query Sequence  GKMFSTGENWSRFFRFNT. AWQWGEREEQAVKQLGKLIQE
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Template Sequence  AFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKY
Template Known Secondary structure 

TT
TT


TT

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   408.410.........420.........430.........440.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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