Job Description P77730 Confidence 99.84% Date Thu Jan 5 12:32:10 GMT 2012 Rank 184 Aligned Residues 321 % Identity 15% Template d1e5ea_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.18

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		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	F	P	L	Q	Q	L	N	R	S	L	A	Q	V	S	K	T	A	T	A	M	S	V	I	E	N	L	P	P	G	N	A	E	L	R	Q	A	I	A	R	R	Y	A	L	Q	G	I	T	I	S	P	D	E	I	V	I	T	A	G	A	L	E	A	L	N	L	S	L	Q	A	V	T	E	P	G	D	W	V	I
Query Conservation
Alig confidence																																															.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.
Template Sequence		S	T	F	V	F	D	N	C	Q	Q	G	G	N	R	F	A	G	Q	E	S	G	Y	I	Y	T	R	L	G	N	P	T	V	S	N	L	E	G	K	I	A	F	L	E	K	T	.	.	.	.	.	.	.	E	A	C	V	A	T	S	S	G	M	G	A	I	A	A	T	V	L	T	I	L	K	A	G	D	H	L	I
Template Known Secondary structure		S	B				S	S									T	T	S	S		S			B	T	T	T																	T		.	.	.	.	.	.	.	S						S	S															T	T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.								.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.					.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure												.	.	.	.
Query SS confidence												.	.	.	.
Query Sequence		V	E	N	P	C	F	Y	G	A	L	.	.	.	.	Q	A	L	E	R	L	R	L	K	A	L	S	V	A	T	D	V	K	E	G	I	D	L	Q	A	L	E	L	A	L	Q	E	Y	P	V	K	A	C	W	L	M	T	N	S	Q	N	P	L	G	F	T	L	T	P	Q	K	K	A	Q	L	V	A	L	L	N	Q
Query Conservation												.	.	.	.
Alig confidence												.	.	.	.																	.	.	.	.	.																							.	.																	.	.
Template Conservation																																.	.	.	.	.																							.	.																	.	.
Template Sequence		S	D	E	C	L	Y	G	C	T	H	A	L	F	E	H	A	L	T	K	F	G	I	Q	V	D	F	I	N	T	A	.	.	.	.	.	I	P	G	E	V	K	K	H	M	K	P	N	T	K	I	V	Y	F	E	T	P	A	.	.	N	P	T	L	K	I	I	D	M	E	R	V	C	K	D	A	.	.	H	S	Q
Template Known Secondary structure				S												T					T	T								T	T	.	.	.	.	.	S	T	T								T	T								S	S		.	.	T	T	T														.	.		T	S
Template Predicted Secondary structure																																.	.	.	.	.																							.	.																	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.						.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.			.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.			.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.
Query SS confidence																																														.	.
Query Sequence		Y	N	V	T	L	I	E	D	D	V	Y	S	E	L	Y	F	G	R	E	K	P	L	P	A	K	A	W	D	R	H	D	G	V	L	H	C	S	S	F	S	K	C	L	V	.	.	P	G	F	R	I	G	W	V	A	A	G	K	H	A	R	K	I	Q	R	L	Q	L	M	S	T	L	S	T	S	S	P	M	Q	L
Query Conservation																																														.	.
Alig confidence																								.	.	.	.	.	.	.	.															.	.
Template Conservation																								.	.	.	.	.	.	.	.
Template Sequence		E	G	V	L	V	I	A	D	N	T	F	C	S	P	M	I	T	N	P	V	D	F	.	.	.	.	.	.	.	.	G	V	D	V	V	V	H	S	A	T	K	Y	I	N	G	H	T	D	V	V	A	G	L	I	C	G	K	A	D	L	L	Q	Q	I	R	M	V	G	I	K	D	I	T	G	S	V	I	S	P	H
Template Known Secondary structure		T	T								T	T	T		T	T	T			G	G	G	G	.	.	.	.	.	.	.	.	T		S						T	T	T	T	T	T		S	S																				T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.									.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.																		.	.	.	.	.	400	.	.	.	.	.	.	.	.	.		410	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query Sequence		A	L	V	D	Y	L	S	T	R	R	Y	D	A	H	L	R	R	L	R	R	Q	L	A	E	R	K	Q	R	A	W	Q	A	L	L	R	Y	L	P	A	E	V	K	I	H	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	S	G	Y	F	L	W	L	E	L	P	E	P	L	.	D	A
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Alig confidence								.	.	.																												.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation								.	.	.																												.	.
Template Sequence		D	A	W	L	I	T	.	.	.	R	G	L	S	T	L	N	I	R	M	K	A	E	S	E	N	A	M	K	V	A	E	Y	L	K	S	H	.	.	P	A	V	E	K	V	Y	Y	P	G	F	E	D	H	E	G	H	D	I	A	K	K	Q	M	R	M	Y	G	S	M	I	T	F	I	L	K	S	G	F	E	G	A
Template Known Secondary structure								.	.	.				T	T																					T		.	.	T	T							T	T		S	S	S	T	T									S	S			S							T	T
Template Predicted Secondary structure								.	.	.																												.	.
Template SS confidence
		249	250	.	.	.	.				.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.			.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.																				.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.		460	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Query Sequence		G	E	L	S	L	A	A	L	T	H	H	I	S	I	A	P	G	K	M	F	S	T	G	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	S	R	F	F	R	F	N	T	A	W	Q	W	G	E	R	E	E	Q	A	V	K	Q	.	L	G	K	L	I	Q
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation
Template Sequence		K	K	L	L	D	N	L	K	L	I	T	L	A	V	S	L	G	G	C	E	S	L	I	Q	H	P	A	S	M	T	H	A	V	V	P	K	E	E	R	E	A	A	G	I	T	D	G	M	I	R	L	S	V	G	I	E	D	A	D	E	L	I	A	D	F	K	Q	G	L	D	A	L	L	R
Template Known Secondary structure							T		S	S	S			S	S				S	S	S						G	G	G	T	T	T	T	T	S								T	T			T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions