Return to main results Retrieve Phyre Job Id

Job DescriptionP77730
Confidence99.92%DateThu Jan 5 12:32:10 GMT 2012
Rank138Aligned Residues386
% Identity13%Templated1c7ga_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   71........80.........90.........100.........110.........120.........130.........140.........150
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Query Sequence  IKMPKAPVIPVTRDEAVDINTYIFDMLQASRDPSVVPFASAFPDPRLFPLQQLNRSLAQVSKTATAMSVIENLPPGNAEL
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Template Sequence  MNYPAEPFRIKSVETVSMISRDERVKKMQEAGYNTFLLNSKDIYIDLLTDSGTNAMSDKQWAGMMIGDEAYAGSENFYHL
Template Known Secondary structure 





SS

S








TTT
GGGS
GGG
S
S
SSS




TTS



SSS
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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   151........160.........170.........180.........190.........200.........210.........220...
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Query Sequence  RQAIARRYALQGITISPDEIVITAGALEALNLSLQAVTEPGDWVIVENPCFYGALQALERLRLKALSVATDVK. . . . . . .
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Template Sequence  EKTVKELFGF. . . . . . . KHIVPTHQGRGAENLLSQLAIKPGQYVAG. NMYFTTTRFHQEKNGATFVDIVRDEAHDASLNL
Template Known Secondary structure 

.......SSS

TT.SS

TT
B
GGGG
TT


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   81........90 .........100.........110......... 120.........130.........140.........150..
 
   224.....230...... ...240.........250.........260.........270.........280. ......
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Query Sequence  . . . EGIDLQALELALQ. . . EYPVKACWLMTNSQNPLGFTLTPQKKAQLVALLNQYNVTLIEDDV. . . . . . . . . . YSELYF
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Template Conservation        
   
   
          
 
    
  

       
  
  

   
     
 
              
 
Template Sequence  PFKGDIDLNKLATLIKEKGAENIAYICLAVTVNLAGGQPVSMANMRAVHEMASTYGIKIFYDATRCVENAYFIKEQEAGY
Template Known Secondary structure  S
TT
B

GGGSSBTTTTSB


T


TTSTT
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   153......160.........170.........180.........190.........200.........210.........220.........230..
 
   288.290.........300.........310.........320.........330.........340......... 350.........360.....
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Query Sequence  GREKPLPAKAWDRHDGVLHCSSFSKCLVPGFRIGWVAAGKHARKIQRLQLMSTLSTSSPMQL. . ALVDYLSTRRYDAHLR
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Template Sequence  ENVSIKDIVHEMFSYADGCTMSGKKDCLVNIGGFLCMNDEEMFSAAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQY
Template Known Secondary structure  TTS
TT
STTTTT

SS
S
T

TTTTT

T
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   233......240.........250.........260.........270.........280.........290.........300.........310..
 
   366...370.........380.........390.........400.........410 .........420. ........430......
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Query Sequence  RLRRQLAERKQRAWQALLRYLPAEVKIHHNDSGYFLWLELPEPLD. . . . . . . . AGELSLAALTH. HISIAPGKMFSTGEN
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Template Sequence  EYIEHRVKQVRYLGDKLREA. . . GVPIVEPTGGHAVFLDARRFCPHLTQDQFPAQSLAASIYMETGVRSMERGIVSAGRS
Template Known Secondary structure  T...T

B
SS

SS
TTS
GGG
S
S
B
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   313......320.........330.. .......340.........350.........360.........370.........380.........
 
   437. .440........ .450.........460.......
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Query Sequence  WS. . . . . . . . . RFFRFNTAWQ. . WGEREEQAVKQLGKLIQER
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Template Sequence  KETGENHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQHK
Template Known Secondary structure  SSS

B


S



TTS

TTG
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   390.........400.........410.........420.........430.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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