Job Description P77730 Confidence 99.94% Date Thu Jan 5 12:32:10 GMT 2012 Rank 119 Aligned Residues 325 % Identity 13% Template d1b9ha_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.00

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		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		D	P	R	L	F	P	L	Q	Q	L	N	R	S	L	A	Q	V	S	K	T	A	T	A	M	S	V	I	E	N	L	P	P	G	N	A	E	L	R	Q	A	I	A	R	R	Y	A	L	Q	G	I	T	I	S	P	D	E	I	V	I	T	A	G	A	L	E	A	L	N	L	S	L	Q	A	V	.	T	E	P	G	D
Query Conservation																																																																												.
Alig confidence																							.	.	.																								.	.	.	.	.	.	.																					.
Template Conservation																							.	.	.																								.	.	.	.	.	.	.
Template Sequence		P	A	W	P	Q	Y	D	D	A	E	R	N	G	L	V	R	A	L	E	Q	G	.	.	.	Q	W	W	R	M	G	G	D	E	V	N	S	F	E	R	E	F	A	A	H	H	G	A	.	.	.	.	.	.	.	A	H	A	L	A	V	T	N	G	T	H	A	L	E	L	A	L	Q	V	M	G	V	G	P	G	T
Template Known Secondary structure				S	S																T	S	.	.	.			B	T	T	T		S													T	T		.	.	.	.	.	.	.	S						S													T	T			T	T
Template Predicted Secondary structure																							.	.	.																								.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30				.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.								.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	V	I	V	E	N	P	C	F	Y	G	A	L	Q	A	L	E	R	L	R	L	K	A	L	S	V	A	T	D	V	K	E	G	I	D	L	Q	A	L	E	L	A	L	Q	E	Y	P	V	K	A	C	W	L	M	T	N	S	Q	N	P	L	G	F	T	L	T	P	Q	K	K	A	Q	L	V	A	L	L	N	Q	Y
Query Conservation
Alig confidence																																																					.	.	.	.												.	.	.
Template Conservation																																																					.	.	.	.												.	.	.
Template Sequence		E	V	I	V	P	A	F	T	F	I	S	S	S	Q	A	A	Q	R	L	G	A	V	T	V	P	V	D	V	D	A	A	T	Y	N	L	D	P	E	A	V	A	A	A	V	T	P	R	T	K	V	I	.	.	.	.	M	P	V	H	M	A	G	L	M	A	D	.	.	.	M	D	A	L	A	K	I	S	A	D	T
Template Known Secondary structure							S	S	S		T									T	T								B		T	T	T			B											T	T					.	.	.	.			B		G	G	G					.	.	.
Template Predicted Secondary structure																																																					.	.	.	.												.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.	.	.	140	.				.	.	.	.	.	.	.	.	150	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.	.
Query Sequence		N	V	T	L	I	E	D	D	V	Y	S	E	L	Y	F	G	R	E	K	P	L	P	A	K	A	W	D	R	H	D	G	V	L	H	C	S	S	F	S	K	C	L	V	P	G	F	R	I	G	W	V	A	A	G	K	H	A	R	K	I	Q	R	L	Q	L	M	S	T	L	S	T	.	.	.	.	.	.	.	.	.
Query Conservation																																																																									.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.																																														.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.
Template Sequence		G	V	P	L	L	Q	D	A	A	H	A	H	G	A	R	W	Q	G	K	R	V	G	.	.	.	.	E	L	D	S	I	A	T	F	S	F	Q	N	G	K	L	M	T	A	G	E	G	G	A	V	V	F	P	D	G	E	T	E	K	Y	E	T	A	F	L	R	H	S	C	G	R	P	R	D	D	R	R	Y	F	H
Template Known Secondary structure		T			B					T	T		T	T				T	T			G	G	.	.	.	.	G	S	S	S								T	T	S	S	S		S	S	S								T	T												T	B	T	T			T	T		S	S
Template Predicted Secondary structure																								.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.					.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
										344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.									.	400	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	S	S	P	M	Q	L	A	L	V	D	Y	L	S	T	R	R	Y	D	A	H	L	R	R	L	R	R	Q	L	A	E	R	K	Q	R	A	W	Q	A	L	L	R	Y	L	P	A	E	V	K	I	H	H	N	D	S	G	.	.	.	.	.	.	.	.	Y	F	L	W	L	E	L	P	E
Query Conservation		.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																.	.	.	.	.																							.	.												.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.																							.	.
Template Sequence		K	I	A	G	S	N	M	R	L	N	E	F	S	A	S	V	L	R	A	Q	L	A	R	.	.	.	.	.	L	D	E	Q	I	A	V	R	D	E	R	W	T	L	L	S	R	L	L	G	A	I	.	.	D	G	V	V	P	Q	G	G	D	V	R	A	D	R	N	S	H	Y	M	A	M	F	R	I	P	G	L	T
Template Known Secondary structure			S				B		B		B												T	T	.	.	.	.	.																					T	S	.	.	T	T								T	T			B				S							T	T
Template Predicted Secondary structure																									.	.	.	.	.																							.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.						.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.			.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.																										.	.	.	440	.	.	.	.	.	.	.	.			.	450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Query Sequence		P	L	D	A	G	E	L	S	L	A	A	L	T	H	H	I	S	I	A	P	G	K	M	F	S	T	G	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	S	R	F	F	R	F	N	T	A	W	Q	.	.	W	G	E	R	E	E	Q	A	V	K	Q	L
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation
Template Sequence		E	E	R	R	N	A	L	V	D	R	L	V	E	A	G	L	P	A	F	A	A	F	R	A	I	Y	R	T	D	A	F	W	E	L	G	A	P	D	E	S	V	D	A	I	A	R	R	C	P	N	T	D	A	I	S	S	D	C	V	W	L	H	H	R	V	L	L	A	G	E	P	E	L	H	A	T	A	E	I	I
Template Known Secondary structure															T	T										G	G	G	S						S	S			S	S								T																G	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
		461	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	L	I	Q	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	A	V	A	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		382	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions