Job Description P77730 Confidence 99.80% Date Thu Jan 5 12:32:10 GMT 2012 Rank 202 Aligned Residues 353 % Identity 11% Template d1ax4a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases Resolution 2.10

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		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	V	P	F	A	S	A	F	P	D	P	R	L	F	P	L	Q	Q	L	N	R	S	L	A	Q	V	S	K	T	A	T	A	M	S	V	I	E	N	L	P	P	G	N	A	E	L	R	Q	A	I	A	R	R	Y	A	L	Q	G	I	T	I	S	P	D	E	I	V	I	T	A	G	A	L	E	A	L	N	L	S
Query Conservation
Alig confidence																																																											.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.
Template Sequence		N	P	F	L	L	P	S	S	A	V	Y	I	D	L	L	T	D	S	G	T	N	A	M	S	D	H	Q	W	A	A	M	I	T	G	D	E	A	Y	A	G	S	R	N	Y	Y	D	L	K	D	K	A	K	E	L	F	N	Y	.	.	.	.	.	.	.	D	Y	I	I	P	A	H	Q	G	R	G	A	E	N	I	L
Template Known Secondary structure			G	G	G	S		G	G	G		S				S		S	S	S														T					S	S	S																		.	.	.	.	.	.	.							S	S
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.								.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.								.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.											.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.				.	.
Predicted Secondary structure												.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.																				.	.	.
Query SS confidence												.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.																				.	.	.
Query Sequence		L	Q	A	V	T	E	P	G	D	W	.	.	.	.	.	.	.	V	I	V	E	N	P	C	F	Y	G	A	L	Q	A	L	E	R	L	R	L	K	A	L	S	V	A	T	D	V	.	.	.	.	.	.	.	.	.	.	K	E	G	I	D	L	Q	A	L	E	L	A	L	Q	E	Y	P	V	K	.	.	.	A	C
Query Conservation												.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.																				.	.	.
Alig confidence												.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation
Template Sequence		F	P	V	L	L	K	Y	K	Q	K	E	G	K	A	K	N	P	V	F	I	S	N	F	H	F	D	T	T	A	A	H	V	E	L	N	G	C	K	A	I	N	I	V	T	E	K	A	F	D	S	E	T	Y	D	D	W	K	G	D	F	D	I	K	K	L	K	E	N	I	A	Q	H	G	A	D	N	I	V	A	I
Template Known Secondary structure												T	T			S	S						S	S												T	T							B		G	G	G	G		T	T	S			T	T	T	T		B														G	G	G
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.											.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		W	L	M	T	N	S	Q	N	P	L	G	F	T	L	T	P	Q	K	K	A	Q	L	V	A	L	L	N	Q	Y	N	V	T	L	I	E	D	D	V	.	.	.	.	.	.	.	.	.	.	Y	S	E	L	Y	F	G	R	E	K	P	L	P	A	K	A	W	D	R	H	D	G	V	L	H	C	S	S	F	S	K	C
Query Conservation																																								.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	S	T	V	T	C	N	S	A	G	G	Q	P	V	S	M	S	N	L	K	E	V	Y	E	I	A	K	Q	H	G	I	F	V	V	M	D	S	A	R	F	C	E	N	A	Y	F	I	K	A	R	D	P	K	Y	K	N	A	T	I	K	E	V	I	F	D	M	Y	K	Y	A	D	A	L	T	M	S	A	K	D	P
Template Known Secondary structure					S	S	B	T	T	T	T	S	B																		T								T	T													G	G	G	T	T											G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.			.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		L	V	P	G	F	R	I	G	W	V	A	A	G	K	H	A	R	K	I	Q	R	L	Q	L	M	S	T	L	S	T	S	S	P	M	Q	.	.	L	A	L	V	D	Y	L	S	T	R	R	Y	D	A	H	L	R	R	L	R	R	Q	L	A	E	R	K	Q	R	A	W	Q	A	L	L	R	Y	L	P	A	E	V	K
Query Conservation																																					.	.
Alig confidence																																					.	.																																						.	.	.
Template Conservation																																																																												.	.	.
Template Sequence		L	L	N	I	G	G	L	V	A	I	R	D	N	E	E	I	F	T	L	A	R	Q	R	C	V	P	M	E	G	F	V	T	Y	G	G	L	A	G	R	D	M	A	A	M	V	Q	G	L	E	E	G	T	E	E	E	Y	L	H	Y	R	I	G	Q	V	K	Y	L	G	D	R	L	R	E	A	.	.	.	G	I	P
Template Known Secondary structure				S	S							S	S																T		S	T	T	T	T	T																T	T																						T	.	.	.	T
Template Predicted Secondary structure																																																																												.	.	.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.				.	.	.
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.									.	.	410	.	.	.	.	.	.	.	.	.	420	.		.	.	.	.	.	.	.	.	430	.	.	.	.										.	.	.	.	.	440	.	.	.	.	.	.	.	.			.	450	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.															.														.	.	.	.	.	.	.	.	.															.	.
Query SS confidence																		.	.	.	.	.	.	.	.															.														.	.	.	.	.	.	.	.	.															.	.
Query Sequence		I	H	H	N	D	S	G	Y	F	L	W	L	E	L	P	E	.	.	.	.	.	.	.	.	P	L	D	A	G	E	L	S	L	A	A	L	T	H	.	H	I	S	I	A	P	G	K	M	F	S	T	G	.	.	.	.	.	.	.	.	.	E	N	W	S	R	F	F	R	F	N	T	A	W	Q	.	.	W	G	E
Query Conservation																		.	.	.	.	.	.	.	.															.														.	.	.	.	.	.	.	.	.															.	.
Alig confidence																		.	.	.	.	.	.	.	.															.														.	.	.	.	.	.	.	.	.															.	.
Template Conservation
Template Sequence		I	Q	Y	P	T	G	G	H	A	V	F	V	D	C	K	K	L	V	P	Q	I	P	G	D	Q	F	P	A	Q	A	V	I	N	A	L	Y	L	E	S	G	V	R	A	V	E	I	G	S	F	L	L	G	R	D	P	A	T	G	E	Q	K	H	A	D	M	E	F	M	R	L	T	I	A	R	R	V	Y	T	N	D
Template Known Secondary structure		B		S	S			S	S						S	T	T	T		T	T	S		G	G	G																						S						B		T	T	T		S	B				S										T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
		452	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	E	Q	A	V	K	Q	L	G	K	L	I	Q	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	M	D	Y	I	A	D	A	L	I	G	L	K	E	K
Template Known Secondary structure												T	T
Template Predicted Secondary structure
Template SS confidence
		426	.	.	.	430	.	.	.	.	.	.	.	.	.	440

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions