Job Description P77730 Confidence 99.94% Date Thu Jan 5 12:32:10 GMT 2012 Rank 118 Aligned Residues 330 % Identity 10% Template c3pj0D_ PDB info PDB header:lyase Chain: D: PDB Molecule:lmo0305 protein; PDBTitle: crystal structure of a putative l-allo-threonine aldolase (lmo0305)2 from listeria monocytogenes egd-e at 1.80 a resolution Resolution 1.80 Å

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		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.			.
Predicted Secondary structure																																																																															.	.
Query SS confidence																																																																															.	.
Query Sequence		F	P	D	P	R	L	F	P	L	Q	Q	L	N	R	S	L	A	Q	V	S	K	T	A	T	A	M	S	V	I	E	N	L	P	P	G	N	A	E	L	R	Q	A	I	A	R	R	Y	A	L	Q	G	I	T	I	S	P	D	E	I	V	I	T	A	G	A	L	E	A	L	N	L	S	L	Q	A	V	T	.	.	E
Query Conservation																																																																															.	.
Alig confidence																												.	.																						.	.	.	.	.	.	.																						.	.
Template Conservation																												.	.																						.	.	.	.	.	.	.
Template Sequence		L	G	G	N	G	P	R	N	V	G	V	L	T	E	A	L	Q	N	I	D	D	N	L	E	S	D	.	.	I	Y	G	N	G	A	V	I	E	D	F	E	T	K	I	A	K	I	L	G	K	.	.	.	.	.	.	.	Q	S	A	V	F	F	P	S	G	T	X	A	Q	Q	I	A	L	R	I	W	A	D	R	K
Template Known Secondary structure		S	S	B	S	S			S								T	T	T	S		T	T					.	.	B	T	T	B	S															T		.	.	.	.	.	.	.	S						S
Template Predicted Secondary structure																												.	.																						.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.								.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.				.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		P	G	D	W	V	I	V	E	N	P	C	F	Y	G	A	.	.	.	L	Q	A	L	E	R	L	R	L	K	A	L	S	V	A	T	D	V	K	E	G	I	D	L	Q	A	L	E	L	A	L	Q	E	Y	P	V	K	A	C	W	L	M	T	N	S	Q	N	P	L	G	F	T	L	T	P	Q	K	K	A	Q	L	V
Query Conservation																	.	.	.
Alig confidence																	.	.	.																.																.	.
Template Conservation																																			.																.	.
Template Sequence		E	N	R	R	V	A	Y	H	P	L	S	H	L	E	I	H	E	Q	D	G	L	K	E	L	Q	Q	I	T	P	L	L	L	G	.	T	A	N	Q	L	L	T	I	D	D	I	K	S	L	R	.	.	E	P	V	S	S	V	L	I	E	L	P	Q	R	E	I	G	G	Q	L	P	A	F	E	E	L	E	K	I	S
Template Known Secondary structure		T								T	T						S	S	T	T														S	.		T	T	S									T		S	.	.	S			S						S	S	B	G	G	G	T	S	B
Template Predicted Secondary structure																																			.																.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	L	N	Q	Y	N	V	T	L	I	E	D	D	V	Y	S	E	L	Y	F	G	R	E	K	P	L	P	A	K	A	W	D	R	H	D	G	V	L	H	C	S	S	F	S	K	C	L	V	P	G	F	R	I	G	W	V	A	A	G	K	H	A	R	K	I	Q	R	L	Q	L	M	S	T	L	S	T	S	S	P
Query Conservation
Alig confidence																																										.	.	.	.
Template Conservation																																										.	.	.	.
Template Sequence		E	Y	C	H	E	Q	G	I	S	L	H	L	D	G	A	R	L	W	E	I	T	P	F	Y	Q	K	S	A	E	E	I	C	A	L	F	D	S	V	Y	V	.	.	.	.	S	F	Y	G	I	G	G	I	A	G	A	I	L	A	G	N	D	D	F	V	Q	E	A	K	I	W	K	R	R	Y	G	G	D	L	I	S
Template Known Secondary structure								T								T	T		G	G	G					T								T	T		S					.	.	.	.								S	S																					T	T				S
Template Predicted Secondary structure																																										.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.					.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.				.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure																																																		.	.	.
Query SS confidence																																																		.	.	.
Query Sequence		M	Q	L	A	L	V	D	Y	L	S	T	R	R	Y	D	A	H	L	R	R	L	R	R	Q	L	A	E	R	K	Q	R	A	W	Q	A	L	L	R	Y	L	P	A	E	V	K	I	H	H	.	.	.	N	D	S	G	Y	F	L	W	L	E	L	P	E	P	L	D	A	G	E	L	S	L	A	A	L	T	H	H	I
Query Conservation																																																		.	.	.
Alig confidence											.	.	.																												.	.								.	.	.
Template Conservation											.	.	.																												.	.
Template Sequence		L	Y	P	Y	I	L	S	A	D	.	.	.	Y	Y	F	E	K	R	I	G	K	X	A	E	Y	F	E	A	A	K	G	L	A	E	R	F	N	S	C	.	.	S	G	V	K	T	V	P	E	V	P	V	S	N	X	F	H	V	Y	F	E	N	S	A	D	E	I	G	A	I	L	T	K	I	Q	D	E	T	G	V
Template Known Secondary structure											.	.	.							G	G	G																	T	S	.	.	T	T					S	S	S		S	S	S							S	S
Template Predicted Secondary structure											.	.	.																												.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.				250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.			.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.					.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure																									.	.	.	.
Query SS confidence																									.	.	.	.
Query Sequence		S	I	A	P	G	K	M	F	S	T	G	E	N	W	S	R	F	F	R	F	N	T	A	.	.	.	.	W	Q	W	G	E	R	E	E	Q	A	V	K	Q	L	G	K	L	I
Query Conservation																									.	.	.	.
Alig confidence														.	.										.	.	.	.
Template Conservation														.	.
Template Sequence		G	I	S	G	Y	L	Q	E	K	S	A	D	.	.	V	C	A	F	E	V	S	V	G	D	A	F	A	E	I	P	A	K	N	L	E	L	V	F	R	C	L	E	K	E	L
Template Known Secondary structure					S							T	T	.	.								B		G	G	G	G	G	S
Template Predicted Secondary structure														.	.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.			.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions