Job Description P77730 Confidence 100.00% Date Thu Jan 5 12:32:10 GMT 2012 Rank 53 Aligned Residues 359 % Identity 15% Template c3pdxA_ PDB info PDB header:transferase Chain: A: PDB Molecule:tyrosine aminotransferase; PDBTitle: crystal structural of mouse tyrosine aminotransferase Resolution 2.91 Å

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		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		S	R	D	P	S	V	V	P	F	A	S	A	F	P	D	P	R	.	.	L	F	P	L	Q	Q	L	N	R	S	L	A	Q	V	S	K	T	A	T	A	M	S	V	I	E	N	L	P	P	G	N	A	E	L	R	Q	A	I	A	R	R	Y	A	L	Q	G	I	T	I	S	P	D	E	I	V	I	T	A	G	A	L
Query Conservation																			.	.
Alig confidence																			.	.																		.	.
Template Conservation																																						.	.
Template Sequence		N	P	N	K	T	V	I	S	L	S	I	G	D	P	T	V	F	G	N	L	P	T	D	P	E	V	T	Q	A	M	K	D	A	L	D	S	.	.	G	K	Y	N	G	Y	A	P	S	I	G	Y	L	S	S	R	E	E	V	A	S	Y	Y	H	C	P	E	A	P	L	E	A	K	D	V	I	L	T	S	G	C	S
Template Known Secondary structure			T	T	S						S				T	T	S	S	S	S	S																T	.	.	T		S	S	S				T	T													T			S	S	S				G	G	G					S	S
Template Predicted Secondary structure																																						.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	L	N	L	S	L	Q	A	V	T	E	P	G	D	W	V	I	V	E	N	P	C	F	Y	G	A	L	Q	A	L	E	R	L	R	L	K	A	L	S	V	A	T	D	V	K	E	G	I	D	L	Q	A	L	E	L	A	L	Q	E	Y	P	V	K	A	C	W	L	M	T	N	S	Q	N	P	L	G	F	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	A	I	E	L	C	L	A	V	L	A	N	P	G	Q	N	I	L	I	P	R	P	G	F	S	L	Y	R	T	L	A	E	S	M	G	I	E	V	K	L	Y	N	L	L	P	E	K	S	W	E	I	D	L	K	Q	L	E	S	L	I	D	E	K	T	A	C	L	V	V	N	N	P	S	N	P	C	G	S	V	F
Template Known Secondary structure										T	T			S	S							S	S													T										G	G	G	T	T									T	T			S	S								S	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.							.	330	.
Predicted Secondary structure																																																																									.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.
Query Sequence		T	P	Q	K	K	A	Q	L	V	A	L	L	N	Q	Y	N	V	T	L	I	E	D	D	V	Y	S	E	L	Y	F	G	R	E	K	P	L	P	A	K	A	W	D	R	H	D	G	V	L	H	C	S	S	F	S	K	C	L	V	P	G	F	R	I	G	W	V	A	A	G	K	H	.	.	.	.	.	.	A	R	K
Query Conservation																																																																									.	.	.	.	.	.
Alig confidence																																																																									.	.	.	.	.	.
Template Conservation
Template Sequence		S	K	R	H	L	Q	K	I	L	A	V	A	E	R	Q	C	V	P	I	L	A	D	E	I	Y	G	D	M	V	F	S	D	C	K	Y	E	P	M	A	T	L	S	T	N	V	P	I	L	S	C	G	G	L	A	R	W	L	V	P	G	W	R	L	G	W	I	L	I	H	D	R	R	D	I	F	G	N	E	I	R
Template Known Secondary structure														T	T	T	T								T	T	T	T		B		S	S	S					G	G	G	G		S	S								B					S		G	G	G										S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.						.
Predicted Secondary structure																																																																												.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.
Query Sequence		I	Q	R	L	Q	L	M	S	T	L	S	T	S	S	P	M	Q	L	A	L	V	D	Y	L	S	T	R	R	Y	D	A	H	L	R	R	L	R	R	Q	L	A	E	R	K	Q	R	A	W	Q	A	L	L	R	Y	L	P	A	E	V	K	I	H	H	N	D	S	G	Y	F	L	W	L	E	L	.	.	.	.	.	P
Query Conservation																																																																												.	.	.	.	.
Alig confidence																																																								.	.																			.	.	.	.	.
Template Conservation																																																								.	.
Template Sequence		D	G	L	V	K	L	S	Q	R	I	L	G	P	C	T	I	V	Q	G	A	L	K	S	I	L	Q	R	T	P	Q	E	F	Y	Q	D	T	L	S	F	L	K	S	N	A	D	L	C	Y	G	A	L	S	A	I	.	.	P	G	L	Q	P	V	R	P	S	G	A	M	Y	L	M	V	G	I	E	M	E	H	F	P
Template Known Secondary structure									T	T	T			S																																									S	.	.	T	T	B			B				B	T	T						B		T	T	S
Template Predicted Secondary structure																																																								.	.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360			.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.		.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		E	P	L	D	A	G	E	L	S	L	A	A	L	T	H	.	H	I	S	I	A	P	G	K	M	F	S	T	G	E	N	W	S	R	F	F	R	F	N	T	A	W	Q	W	G	E	R	E	E	Q	A	V	K	Q	L	G	K	L	I	Q	E	R
Query Conservation																	.
Alig confidence																	.													.	.	.	.										.
Template Conservation																														.	.	.	.										.
Template Sequence		E	F	E	N	D	V	E	F	T	E	R	L	I	A	E	Q	S	V	H	C	L	P	A	T	C	F	E	Y	.	.	.	.	P	N	F	F	R	V	V	I	T	.	V	P	E	V	M	M	L	E	A	C	S	R	I	Q	E	F	C	E	Q	H
Template Known Secondary structure		S		S	S																			G	G	G	G	T		.	.	.	.		S						S		.	S																	T	T	T
Template Predicted Secondary structure																														.	.	.	.										.
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.					.	.	.	.	.	.	.	420	.		.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions