Job Description P77730 Confidence 99.85% Date Thu Jan 5 12:32:10 GMT 2012 Rank 183 Aligned Residues 314 % Identity 16% Template c3ndnC_ PDB info PDB header:lyase Chain: C: PDB Molecule:o-succinylhomoserine sulfhydrylase; PDBTitle: crystal structure of o-succinylhomoserine sulfhydrylase from2 mycobacterium tuberculosis covalently bound to pyridoxal-5-phosphate Resolution 1.85 Å

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		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	F	P	L	Q	Q	L	N	R	S	L	A	Q	V	S	K	T	A	T	A	M	S	V	I	E	N	L	P	P	G	N	A	E	L	R	Q	A	I	A	R	R	Y	A	L	Q	G	I	T	I	S	P	D	E	I	V	I	T	A	G	A	L	E	A	L	N	L	S	L	Q	A	V	T	E	P	G	D	W	V	I
Query Conservation
Alig confidence																																															.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.
Template Sequence		S	G	Y	V	Y	G	S	A	A	V	A	E	K	S	F	A	G	E	L	D	H	Y	V	Y	S	R	Y	G	N	P	T	V	S	V	F	E	E	R	L	R	L	I	E	G	A	.	.	.	.	.	.	.	P	A	A	F	A	T	A	S	G	M	A	A	V	F	T	S	L	G	A	L	L	G	A	G	D	R	L	V
Template Known Secondary structure		S	B				S	S									T	T	S	S					B	T	T	T																	T		.	.	.	.	.	.	.	S						S	S											T	T			T	T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.								.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		196	.	.	.	200	.	.	.					.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure										.	.	.	.
Query SS confidence										.	.	.	.
Query Sequence		V	E	N	P	C	F	Y	G	.	.	.	.	A	L	Q	A	L	E	R	L	R	L	K	A	L	S	V	A	T	D	V	K	E	G	I	D	L	Q	A	L	E	L	A	L	Q	E	Y	P	V	K	A	C	W	L	M	T	N	S	Q	N	P	L	G	F	T	L	T	P	Q	K	K	A	Q	L	V	A	L	L	N	Q
Query Conservation										.	.	.	.
Alig confidence										.	.	.	.																			.	.	.	.	.																							.	.									.	.	.
Template Conservation																																.	.	.	.	.																							.	.									.	.	.
Template Sequence		A	A	R	S	L	F	G	S	C	F	V	V	C	S	E	I	L	P	R	W	G	V	Q	T	V	F	V	D	G	D	.	.	.	.	.	D	L	S	Q	W	E	R	A	L	S	V	P	T	Q	A	V	F	F	E	T	P	S	.	.	N	P	M	Q	S	L	V	D	.	.	.	I	A	A	V	T	E	L	A	H	A
Template Known Secondary structure				S	S											T					T	T								T	T	.	.	.	.	.									T	T	S			S						S	S		.	.	T	T	T						.	.	.
Template Predicted Secondary structure																																.	.	.	.	.																							.	.									.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.						.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.			.	170	.	.	.	.	.	.				.	.	.	180	.	.	.	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	N	V	T	L	I	E	D	D	V	Y	S	E	L	Y	F	G	R	E	K	P	L	P	A	K	A	W	D	R	H	D	G	V	L	H	C	S	S	F	S	K	C	L	V	P	G	F	R	I	G	W	V	A	A	G	K	H	A	R	K	I	Q	R	L	Q	L	M	S	T	L	S	T	S	S	P	M	Q	L	A	L
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.
Template Sequence		A	G	A	K	V	V	L	D	N	V	F	A	.	.	.	.	.	.	.	.	T	P	L	L	Q	Q	G	F	P	L	G	V	D	V	V	V	Y	S	G	T	H	I	D	G	Q	G	R	V	L	G	G	A	I	L	G	D	R	E	Y	I	D	G	P	V	Q	K	L	M	R	H	T	G	P	A	M	S	A	F	N	A
Template Known Secondary structure		T	T								T	T	T	.	.	.	.	.	.	.	.								G	G	G	T		S										S		S	S																T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.									.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.																		.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Query Sequence		V	D	Y	L	S	T	R	R	Y	D	A	H	L	R	R	L	R	R	Q	L	A	E	R	K	Q	R	A	W	Q	A	L	L	R	Y	L	P	A	E	V	K	I	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	N	D	S	G	Y	F	L	W	L	E	L	P	E	P	L	D	.	.	.	.
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Alig confidence						.	.	.																												.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation						.	.	.																												.	.
Template Sequence		W	V	L	L	.	.	.	K	G	L	E	T	L	A	I	R	V	Q	H	S	N	A	S	A	Q	R	I	A	E	F	L	N	G	H	.	.	P	S	V	R	W	V	R	Y	P	Y	L	P	S	H	P	Q	Y	D	L	A	K	R	Q	M	S	G	G	G	T	V	V	T	F	A	L	D	C	P	E	D	V	A	K	Q
Template Known Secondary structure						.	.	.																										T		.	.	T	T							T	T	S	T	T	S	T	T									S	S			S							S	S		G	G	G
Template Predicted Secondary structure						.	.	.																												.	.
Template SS confidence
		260	.	.	.				.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290			.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
			411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.																				.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	A	G	E	L	S	L	A	A	L	T	H	H	I	S	I	A	P	G	K	M	F	S	T	G	E	N	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	R	F	F	R	F	N	T	A	W	Q	W	G	E	R	E	E	Q	A	V	K	Q
Query Conservation		.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	A	F	E	V	L	D	K	M	R	L	I	D	I	S	N	N	L	G	D	A	K	S	L	V	T	H	P	A	T	T	T	H	R	A	M	G	P	E	G	R	A	A	I	G	L	G	D	G	V	V	R	I	S	V	G	L	E	D	T	D	D	L	I	A	D	I	D	R
Template Known Secondary structure											S	S	S				S			S		S	S						G	G	G	T	T	T	S	T	T							T	T	T			T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions