 |
Job Description | P77730 | Confidence | 96.50% | Date | Thu Jan 5 12:32:10 GMT 2012 |
Rank | 271 | Aligned Residues | 51 |
% Identity | 22% | Template | c3lwfD_ |
PDB info |
PDB header:transcription regulator | Chain: D: PDB Molecule:putative transcriptional regulator; |
PDBTitle: crystal structure of putative transcriptional regulator (np_470886.1)2 from listeria innocua at 2.06 a resolution
|
Resolution | 2.06 Å |
|
  |   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
|
. | . | . | . | . | . | . | 70 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
| . | . |
|  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | G | D | R | L | P | S | L | R | D | Q | V | A | L | S | G | M | S | F | M | T | V | S | H | A | Y | Q | L | L | E | S | Q | G | Y | I | I | A | R | P | Q | S | . |
. |
G | Y | Y | V | A | P | Q | A | I | K |
Query Conservation |   |
  |
|   |
|
|
|
|   |
|   |
|
|   |   |
|   |
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |
|   |   |   |   |
|   | . | . |
|   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |
|   |   |   |   |
|   |
|
|
|   |   |
|   |   |
|
|
|
|   |
|   |
|
|   |   |
|
|
|   |
|
|
|   |   |   |   |
Template Sequence |   |
I | G | D | G | P | I | S | L | R | S | I | A | Q | D | K | N | L | S | E | H | Y | L | E | Q | L | I | G | P | L | R | N | A | G | I | V | K | S | I | R | G | A | H | G | G | Y | V | L | N | G | D | P | E | K |
Template Known Secondary structure |   |
T | T | S |
|
| B |
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |
| S | T | T |
|  |  |  |  |
| S |
| T | T | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|