Job Description P77730 Confidence 100.00% Date Thu Jan 5 12:32:10 GMT 2012 Rank 48 Aligned Residues 355 % Identity 14% Template c3k7yA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aspartate aminotransferase; PDBTitle: aspartate aminotransferase of plasmodium falciparum Resolution 2.80 Å

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		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.				.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.																																																			.
Query SS confidence																					.	.	.																																																			.
Query Sequence		I	F	D	M	L	Q	A	S	R	D	P	S	V	V	P	F	A	S	A	.	.	.	F	P	D	P	R	L	F	P	L	Q	Q	L	N	R	S	L	A	Q	V	S	K	T	A	T	A	M	S	V	I	E	N	L	P	P	G	N	A	E	L	R	Q	A	I	A	R	R	Y	A	L	Q	.	G	I	T	I	S	P	D
Query Conservation																					.	.	.																																																			.
Alig confidence																					.	.	.																											.	.																							.
Template Conservation																																																		.	.
Template Sequence		T	A	R	E	F	K	E	D	T	C	E	E	K	I	N	L	S	I	G	V	C	C	N	D	D	G	D	L	H	I	F	D	S	V	L	N	A	D	K	L	V	T	E	N	Y	K	E	K	.	.	P	Y	L	L	G	N	G	T	E	D	F	S	T	L	T	Q	N	L	I	F	G	N	N	S	K	Y	I	E	D	K
Template Known Secondary structure							T	T	S	S		S	S					S		S	S		B		T	T	S	S	B																					.	.				T	T	S	S															S	S		T	T	T	T	T	T
Template Predicted Secondary structure																																																		.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		169	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.				230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure				.	.																						.																																							.	.	.
Query SS confidence				.	.																						.																																							.	.	.
Query Sequence		E	I	.	.	V	I	T	A	G	A	L	E	A	L	N	L	S	L	Q	A	V	T	E	P	G	.	D	W	V	I	V	E	N	P	C	F	Y	G	A	L	Q	A	L	E	R	L	R	L	K	A	L	S	V	A	T	D	V	K	E	G	I	D	L	Q	.	.	.	A	L	E	L	A	L	Q	E	Y	P	V	K	A
Query Conservation				.	.																						.																																							.	.	.
Alig confidence				.	.																						.																																							.	.	.
Template Conservation
Template Sequence		K	I	C	T	I	Q	C	I	G	G	T	G	A	I	F	V	L	L	E	F	L	K	M	L	N	V	E	T	L	Y	V	T	N	P	P	Y	I	N	H	V	N	M	I	E	S	R	G	F	N	L	K	Y	I	N	F	F	D	Y	N	L	I	D	I	N	Y	D	L	F	L	N	D	L	R	N	I	P	N	G	S	S
Template Known Secondary structure																								T	T	T								S	S											T	T	T											T	T	T	T														S		S	S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.				.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.
Predicted Secondary structure																																																									.	.	.																			.
Query SS confidence																																																									.	.	.																			.
Query Sequence		C	W	L	M	T	N	S	Q	N	P	L	G	F	T	L	T	P	Q	K	K	A	Q	L	V	A	L	L	N	Q	Y	N	V	T	L	I	E	D	D	V	Y	S	E	L	Y	F	G	R	E	K	P	L	P	A	K	A	.	.	.	W	D	R	H	D	G	V	L	H	C	S	S	F	S	K	C	L	V	.	P	G	F
Query Conservation																																																									.	.	.																			.
Alig confidence																																																									.	.	.																			.
Template Conservation
Template Sequence		V	I	L	Q	I	S	C	Y	N	P	C	S	V	N	I	E	E	K	Y	F	D	E	I	I	E	I	V	L	H	K	K	H	V	I	I	F	D	I	A	Y	Q	G	F	G	H	T	N	L	E	E	D	V	L	L	I	R	K	F	E	E	K	N	I	A	F	S	V	C	Q	S	F	S	K	N	M	S	L	Y	G	E
Template Known Secondary structure							S	S		T	T	T																												S		T	T	T	S	S	S	S	T	T	G	G	G								T	T	T										T	T	T	S			T	T	T
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		319	320	.	.	.	.	.									.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360					.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.																																				.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.																																				.	.	.	.
Query Sequence		R	I	G	W	V	A	A	.	.	.	.	.	.	.	.	G	K	H	A	R	K	I	Q	R	L	Q	L	M	S	T	L	S	T	S	S	P	M	Q	L	A	L	V	D	Y	L	S	T	R	R	Y	.	.	.	.	D	A	H	L	R	R	L	R	R	Q	L	A	E	R	K	Q	R	A	W	Q	A	L	L	R	Y	L
Query Conservation									.	.	.	.	.	.	.	.																																				.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.																																				.	.	.	.
Template Conservation
Template Sequence		R	A	G	A	L	H	I	V	C	K	N	Q	E	E	K	K	I	V	F	N	N	L	C	F	I	V	R	K	F	Y	S	S	P	V	I	H	T	N	R	I	L	C	Q	L	L	N	N	Q	N	L	K	L	N	W	I	K	E	L	S	Q	L	S	Q	R	I	T	N	N	R	I	L	F	F	N	K	L	E	T	Y	Q
Template Known Secondary structure		T									S	S																	T	T	T	S	S																																																G
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
							387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	P	A	E	V	K	I	H	H	N	D	S	G	Y	F	L	W	L	E	L	P	E	P	L	D	A	G	E	L	S	L	A	A	L	T	H	H	I	S	I	A	P	G	K	M	F	S	T	G	E	N	W	S	R	F	F	R	F	N	T	A	W	Q	W	G	E	R	E	E	Q	A	V	K	Q	L	G
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																						.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	K	Y	N	L	N	Y	D	W	N	V	Y	K	K	Q	R	G	L	F	S	F	V	P	L	L	A	.	.	.	.	.	K	I	A	E	H	L	K	T	H	H	I	Y	I	I	N	N	G	.	.	.	.	.	.	.	.	.	.	.	.	R	I	N	V	S	G	I	T	K	N	N	V	D	Y	I	A	D	K	I	C
Template Known Secondary structure		G	G	G	T					G	G	G	G	S	S			S	S					G	G	G	G	.	.	.	.	.	G	G	T	T	T	T	T	T	T	T					T	T	S	.	.	.	.	.	.	.	.	.	.	.	.				G	G	G			T	T
Template Predicted Secondary structure																												.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.						.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.													380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
		462	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	I	Q	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	L	S	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		400	.	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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