Job Description P77730 Confidence 100.00% Date Thu Jan 5 12:32:10 GMT 2012 Rank 12 Aligned Residues 369 % Identity 17% Template c3ihjA_ PDB info PDB header:transferase Chain: A: PDB Molecule:alanine aminotransferase 2; PDBTitle: human alanine aminotransferase 2 in complex with plp Resolution 2.30 Å

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		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.										.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.																										.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.																										.	.
Query Sequence		I	F	D	M	L	Q	A	S	R	D	P	S	V	V	P	F	A	S	A	F	P	D	P	R	L	F	P	L	Q	Q	L	N	R	S	L	A	Q	V	S	K	T	A	T	A	.	.	.	.	.	.	.	.	.	M	S	V	I	E	N	L	P	P	G	N	A	E	L	R	Q	A	I	A	R	R	Y	A	L	Q	.	.
Query Conservation																																														.	.	.	.	.	.	.	.	.																										.	.
Alig confidence																							.	.																						.	.	.	.	.	.	.	.	.																										.	.
Template Conservation																							.	.
Template Sequence		I	E	L	E	L	Q	R	G	I	K	K	P	F	T	E	V	I	R	A	N	P	.	.	I	T	F	L	R	Q	V	M	A	L	C	T	Y	P	N	L	L	D	S	P	S	F	P	E	D	A	K	K	R	A	R	R	I	L	Q	A	C	S	Q	G	V	N	C	I	R	E	D	V	A	A	Y	I	T	R	R	D	G
Template Known Secondary structure								T	T				S	S	S	S		B					.	.														G	G	G	G	G		S	S	S																		S																T	T
Template Predicted Secondary structure																							.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.					.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230							.
Predicted Secondary structure																																.	.	.	.																																								.	.	.	.	.	.
Query SS confidence																																.	.	.	.																																								.	.	.	.	.	.
Query Sequence		G	I	T	I	S	P	D	E	I	V	I	T	A	G	A	L	E	A	L	N	L	S	L	Q	A	V	T	E	P	G	.	.	.	.	D	W	V	I	V	E	N	P	C	F	Y	G	A	L	Q	A	L	E	R	L	R	L	K	A	L	S	V	A	T	D	V	K	E	G	I	D	L	Q	A	.	.	.	.	.	.	L
Query Conservation																																.	.	.	.																																								.	.	.	.	.	.
Alig confidence																																.	.	.	.																																								.	.	.	.	.	.
Template Conservation
Template Sequence		G	V	P	A	D	P	D	N	I	Y	L	T	T	G	A	S	D	G	I	S	T	I	L	K	I	L	V	S	G	G	G	K	S	R	T	G	V	M	I	P	I	P	Q	Y	P	L	Y	S	A	V	I	S	E	L	D	A	I	Q	V	N	Y	Y	L	D	E	E	N	C	W	A	L	N	V	N	E	L	R	R	A	V
Template Known Secondary structure		T					G	G	G					S	S																	G	G	G	S								S			T									T	T									B	G	G	G	T	T	B
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.										.	.	.	.	.	300	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.	.
Query Sequence		E	L	A	L	Q	E	Y	P	V	K	A	C	W	L	M	T	N	S	Q	N	P	L	G	F	T	L	T	P	Q	K	K	A	Q	L	V	A	L	L	N	Q	Y	N	V	T	L	I	E	D	D	V	Y	S	E	L	Y	F	G	R	E	K	P	L	P	.	.	.	.	.	.	.	.	.	A	K	A	W	D	R	H	D
Query Conservation																																																																	.	.	.	.	.	.	.	.	.
Alig confidence																	.																																																.	.	.	.	.	.	.	.	.
Template Conservation																	.
Template Sequence		Q	E	A	K	D	H	C	D	P	K	V	L	C	I	I	.	N	P	G	N	P	T	G	Q	V	Q	S	R	K	C	I	E	D	V	I	H	F	A	W	E	E	K	L	F	L	L	A	D	E	V	Y	Q	D	N	V	Y	S	P	D	C	R	F	H	S	F	K	K	V	L	Y	E	M	G	P	E	Y	S	S	N	V
Template Known Secondary structure					T	T	T	S									.	S	S		T	T	T																				T								T	T	T	T		B			T	T													T						T	T
Template Predicted Secondary structure																	.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		303	.	.	.	.	.	.	310	.	.	.	.	.			.	.	.	.	320	.	.	.	.	.				.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.									.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.											.	.	.																																		.	.	.	.	.	.	.	.
Query SS confidence															.	.											.	.	.																																		.	.	.	.	.	.	.	.
Query Sequence		G	V	L	H	C	S	S	F	S	K	C	L	V	.	.	P	G	F	R	I	G	W	V	A	A	.	.	.	G	K	H	A	R	K	I	Q	R	L	Q	L	M	S	T	L	S	T	S	S	P	M	Q	L	A	L	V	D	Y	L	S	T	R	.	.	.	.	.	.	.	.	R	Y	D	A	H	L	R	R	L	R	R
Query Conservation															.	.											.	.	.																																		.	.	.	.	.	.	.	.
Alig confidence															.	.											.	.	.																																		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	A	S	F	H	S	T	S	K	G	Y	M	G	E	C	G	Y	R	G	G	Y	M	E	V	I	N	L	H	P	E	I	K	G	Q	L	V	K	L	L	S	V	R	L	C	P	P	V	S	G	Q	A	A	M	D	I	V	V	N	P	P	V	A	G	E	E	S	F	E	Q	F	S	R	E	K	E	S	V	L	G
Template Known Secondary structure									S	S	S	S	T	T			S	S	S									S																S															T					T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.													.	.	.	410	.	.	.	.	.	.	.	.	.	420	.		.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.																.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.																.
Query Sequence		Q	L	A	E	R	K	Q	R	A	W	Q	A	L	L	R	Y	L	P	A	E	V	K	I	H	H	N	D	S	G	Y	F	L	W	L	E	L	P	.	.	.	.	.	.	.	.	.	.	.	.	E	P	L	D	A	G	E	L	S	L	A	A	L	T	H	.	H	I	S	I	A	P	G	K	M	F	S	T	G	E	N
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.																.
Alig confidence																		.	.																				.	.	.	.	.	.	.	.	.	.	.	.																.															.
Template Conservation																		.	.																																																														.
Template Sequence		N	L	A	K	K	A	K	L	T	E	D	L	F	N	Q	V	.	.	P	G	I	H	C	N	P	L	Q	G	A	M	Y	A	F	P	R	I	F	I	P	A	K	A	V	E	A	A	Q	A	H	Q	M	A	P	D	M	F	Y	C	M	K	L	L	E	E	T	G	I	C	V	V	P	G	S	G	F	G	Q	R	E	.
Template Known Secondary structure																T	S	.	.	T	T								B	S	S																			T	T	S																B					G	G	G	T				T	.
Template Predicted Secondary structure																		.	.																																																														.
Template SS confidence
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.			.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	S	R	F	F	R	F	N	T	A	W	Q	W	G	E	R	E	E	Q	A	V	K	Q	L	G	K	L	I	Q	E	R	L
Query Conservation
Alig confidence												.
Template Conservation												.
Template Sequence		G	T	Y	H	F	R	M	T	I	L	.	P	P	V	E	K	L	K	T	V	L	Q	K	V	K	D	F	H	I	N	F	L
Template Known Secondary structure		T			B							.	S
Template Predicted Secondary structure												.
Template SS confidence
		489	490	.	.	.	.	.	.	.	.		.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.