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Job DescriptionP77730
Confidence100.00%DateThu Jan 5 12:32:10 GMT 2012
Rank27Aligned Residues340
% Identity21%Templatec3h14A_
PDB info PDB header:transferaseChain: A: PDB Molecule:aminotransferase, classes i and ii; PDBTitle: crystal structure of a putative aminotransferase from silicibacter2 pomeroyi
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SRDPSVVPFASAFPDPRLFPLQQLNRSLAQVSKTATAMSVIENLPPGNAELRQAIARRYALQ. GITISPDEIVITAGALE
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Template Sequence  EAGRRIIHXEVGQPGTGAPR. . GAVEALAKSLE. . . . . . . . . . . . . GLPALRQRIARLYGEWYGVDLDPGRVVITPGSSG
Template Known Secondary structure  TT





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   179180.........190.........200.........210.........220.........230.........240.........250........
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Query Sequence  ALNLSLQAVTEPGDWVIVENPCFYGALQALERLRLKALSVATDVKEGIDLQALELALQEYPVKACWLMTNSQNPLGFTLT
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Template Sequence  GFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGLDLA. . . GLXVASPANPTGTXLD
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TT
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   103......110.........120.........130.........140.........150.........160... ......170.........
 
   259260.........270.........280.........290.........300.........310..... ....320...... ...330......
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Query Sequence  PQKKAQLVALLNQYNVTLIEDDVYSELYFGREKPLPAKAWDRHDGVLHCSSFSKCLV. PGFRIGWVAAG. KHARKIQRLQ
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Template Sequence  HAAXGALIEAAQAQGASFISDEIYHGIEYEAKAVTAL. . . ELTDECYVINSFSKYFSXTGWRVGWXVVPEDQVRVVERIA
Template Known Secondary structure  TT

TTTT
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   180.........190.........200.........210...... ...220.........230.........240.........250......
 
   337..340.........350.........360.........370.........380.........390.........400....... ..410.....
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Query Sequence  LMSTLSTSSPMQLALVDYLSTRRYDAHLRRLRRQLAERKQRAWQALLRYLPAEVKIHHNDSGYFLWLELPE. PLDAGELS
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Template Sequence  QNXFICAPHASQVAALAAL. . . DCDAELQANLDVYKANRKLXLERLPKA. . GFTRIAPPDGAFYVYADVSDLTDDSRAFA
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T...T
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   257..260.........270..... ....280.........290.........300.. .......310.........320.........330.
 
   416...420. ........430.........440.........450.........460.......
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Query Sequence  LAALTH. HISIAPGKMFSTGENWSRFFRFNTAWQWGEREEQAVKQLGKLIQER
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Template Sequence  AEILEKAGVAVTPGLDFDP. ERGAGTLRFSYAR. ATADIEEGLDRLEAFXQAR
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GGGT
T.TTGGG

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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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