Phyre 2 alignment of P77730 with c3gwpA

Job Description P77730
Confidence 99.63% Date Thu Jan 5 12:32:10 GMT 2012

Rank 251 Aligned Residues 285

% Identity 15% Template c3gwpA_

PDB info PDB header:lyase Chain: A: PDB Molecule:carbon-sulfur lyase involved in aluminum resistance; PDBTitle: crystal structure of carbon-sulfur lyase involved in aluminum2 resistance (yp_878183.1) from clostridium novyi nt at 2.90 a3 resolution

Resolution 2.90 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.				.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																																.																							.	.	.
Query SS confidence																																.																							.	.	.
Query Sequence	L	Q	Q	L	N	R	S	L	A	Q	V	S	K	T	A	T	A	M	S	V	I	E	N	L	P	P	G	N	A	E	L	.	R	Q	A	I	A	R	R	Y	A	L	Q	G	I	T	I	S	P	D	E	I	V	I	.	.	.	T	A	G	A	L	E	A	L	N	L	S	L	Q	A	V	T	E	P	G	D	W	V	I
Query Conservation																																.																							.	.	.
Alig confidence																																.												.	.	.									.	.	.
Template Conservation																																												.	.	.
Template Sequence	F	N	Q	L	K	V	L	N	A	F	Q	E	E	R	I	S	E	A	H	F	T	N	S	S	G	Y	G	Y	G	D	I	G	R	D	S	L	D	A	V	Y	A	R	V	.	.	.	F	N	T	E	S	A	L	V	R	P	H	F	V	N	G	T	H	A	L	G	A	A	L	F	G	N	L	R	P	G	N	T	X	L
Template Known Secondary structure													T	T			G	G	G	S					T	T		T	T															.	.	.	T	T		S					B	T	T			S															T	T
Template Predicted Secondary structure																																												.	.	.
Template SS confidence
	42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.				.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.

	196	.	.	.	200	.	.	.	.	.													.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.																																								.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.																																								.
Query Sequence	V	E	N	P	C	F	Y	G	A	L	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	L	E	R	L	R	L	K	A	L	S	V	A	T	D	V	K	E	G	I	D	L	Q	A	L	E	L	A	L	Q	E	Y	P	V	K	A	C	W	.	L	M	T	N	S	Q	N	P	L	G	F	T	L	T	P	Q	K	K
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.																																								.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.																																								.
Template Conservation
Template Sequence	S	V	C	G	E	P	Y	D	T	L	H	D	V	I	G	I	T	E	N	S	N	X	G	S	L	K	E	F	G	I	N	Y	K	Q	V	D	L	K	E	D	G	K	P	N	L	E	E	I	E	K	V	L	K	E	D	E	S	I	T	L	V	H	I	Q	R	S	T	G	Y	G	W	R	R	A	L	L	I	E	D	I
Template Known Secondary structure		S	S	S	S			T	T						T	S	S				T	T			T	G	G	G	T								B		T	T	S	S	B													T	T									S		T	T		S	S
Template Predicted Secondary structure
Template SS confidence
	119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.

	263	.	.	.	.	.	.	270	.	.	.			.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.																																													.
Query SS confidence												.	.																																													.
Query Sequence	A	Q	L	V	A	L	L	N	Q	Y	N	.	.	V	T	L	I	E	D	D	V	Y	S	E	L	Y	F	G	R	E	K	P	L	P	A	K	A	W	D	R	H	D	G	V	L	H	C	S	S	F	S	K	C	L	V	P	G	.	F	R	I	G	W	V	A	A	G	K	H	A	R	K	I	Q	R	L	Q	L	M	S
Query Conservation												.	.																																													.
Alig confidence												.	.																				.	.	.	.	.	.	.																			.
Template Conservation																																	.	.	.	.	.	.	.
Template Sequence	K	S	I	V	D	C	V	K	N	I	R	K	D	I	I	C	F	V	D	N	C	Y	G	E	F	X	D	T	K	E	P	T	.	.	.	.	.	.	.	D	V	G	A	D	L	I	A	G	S	L	I	N	I	G	G	G	I	A	P	T	G	G	Y	L	A	G	T	K	D	C	I	E	K	T	S	Y	R	L	T	V
Template Known Secondary structure												T	T	S							T	T		T	T	S	S	S	S		G	G	.	.	.	.	.	.	.	G	G	T		S									T	T	T	T	T			S																			S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.
Template SS confidence
	199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230								.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

	340	.							.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390			.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure			.	.	.	.	.	.																																																		.	.
Query SS confidence			.	.	.	.	.	.																																																		.	.
Query Sequence	T	L	.	.	.	.	.	.	S	T	S	S	P	M	Q	L	A	L	V	D	Y	L	S	T	R	R	Y	D	A	H	L	R	R	L	R	R	Q	L	A	E	R	K	Q	R	A	W	Q	A	L	L	R	Y	L	P	A	E	V	.	.	K	I	H	H	N	D	S	G	Y	F	L	W	L	E	L	P	E	P	L	D	A
Query Conservation			.	.	.	.	.	.																																																		.	.
Alig confidence			.	.	.	.	.	.															.	.	.	.	.	.	.	.																												.	.
Template Conservation																							.	.	.	.	.	.	.	.
Template Sequence	P	G	I	G	G	E	C	G	S	T	F	G	V	V	R	S	X	Y	Q	G	L	F	.	.	.	.	.	.	.	.	L	A	P	H	I	S	X	E	A	L	K	G	A	I	L	C	S	R	I	X	E	L	A	G	F	E	V	X	P	K	Y	D	E	K	R	S	D	I	I	Q	S	I	K	F	N	D	K	D	K	L
Template Known Secondary structure	T	T	T	G	G	G	S				T	T											.	.	.	.	.	.	.	.																							T	T					S		T	T	S			S	S	S							S	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.
Template SS confidence
	273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.									.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

	412	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	G	E	L	S	L	A	A	L	T	H	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence	I	E	F	C	K	G	I	Q	T	G	S
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
	345	.	.	.	.	350	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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