Job Description P77730 Confidence 99.91% Date Thu Jan 5 12:32:10 GMT 2012 Rank 149 Aligned Residues 315 % Identity 15% Template c3frkB_ PDB info PDB header:transferase Chain: B: PDB Molecule:qdtb; PDBTitle: x-ray structure of qdtb from t. thermosaccharolyticum in2 complex with a plp:tdp-3-aminoquinovose aldimine Resolution 2.15 Å

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		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		L	Q	Q	L	N	R	S	L	A	Q	V	S	K	T	A	T	A	M	S	V	I	E	N	L	P	P	G	N	A	E	L	R	Q	A	I	A	R	R	Y	A	L	Q	G	I	T	I	S	P	D	E	I	V	I	T	A	G	A	L	E	A	L	N	L	S	L	Q	A	V	.	T	E	P	G	D	W	V	I	V	E	N
Query Conservation																																																																						.
Alig confidence																	.	.	.	.	.																						.	.	.	.	.	.	.																					.
Template Conservation																	.	.	.	.	.																						.	.	.	.	.	.	.
Template Sequence		E	Y	E	I	K	F	K	F	E	E	I	Y	K	R	N	.	.	.	.	.	W	F	I	L	G	D	E	D	K	K	F	E	Q	E	F	A	D	Y	C	N	V	.	.	.	.	.	.	.	N	Y	C	I	G	C	G	N	G	L	D	A	L	H	L	I	L	K	G	Y	D	I	G	F	G	D	E	V	I	V	P	S
Template Known Secondary structure																T	.	.	.	.	.			S	S															T	T	S	.	.	.	.	.	.	.	S						S													T	T			T	T							T
Template Predicted Secondary structure																	.	.	.	.	.																						.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30						.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.								.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	C	F	Y	G	A	L	Q	A	L	E	R	L	R	L	K	A	L	S	V	A	T	D	V	K	E	G	I	D	L	Q	A	L	E	L	A	L	Q	E	Y	P	V	K	A	C	W	L	M	T	N	S	Q	N	P	L	G	F	T	L	T	P	Q	K	K	A	Q	L	V	A	L	L	N	Q	Y	N	V	T	L	I	E
Query Conservation
Alig confidence																												.	.																							.	.									.	.	.
Template Conservation																												.	.																							.	.									.	.	.
Template Sequence		N	T	F	I	A	T	A	L	A	V	S	Y	T	G	A	K	P	I	F	V	E	P	D	I	R	T	.	.	Y	N	I	D	P	S	L	I	E	S	A	I	T	E	K	T	K	A	I	I	A	V	.	.	H	L	Y	G	Q	P	A	D	.	.	.	M	D	E	I	K	R	I	A	K	K	Y	N	L	K	L	I	E
Template Known Secondary structure		T	S											T	T										T	T	T	.	.	T				G	G	G	T	G	G	G			T	T								.	.		G	G	G	S				.	.	.											T	T
Template Predicted Secondary structure																												.	.																							.	.									.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.												.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	D	V	Y	S	E	L	Y	F	G	R	E	K	P	L	P	A	K	A	W	D	R	H	D	G	V	L	H	C	S	S	F	S	K	C	L	V	P	G	F	R	I	G	W	V	A	A	G	K	H	A	R	K	I	Q	R	L	Q	L	M	S	T	L	.	.	.	.	.	.	.	.	.	.	.	S	T	S	S	P	M
Query Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.																																																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.
Template Sequence		D	A	A	Q	A	.	.	.	.	H	G	S	L	Y	K	G	M	K	V	G	S	L	G	D	A	A	G	F	S	F	Y	P	A	K	N	L	G	S	L	G	D	G	G	A	V	V	T	N	D	K	D	L	A	E	K	I	K	A	L	S	N	Y	G	S	E	K	K	Y	H	H	I	Y	K	G	F	N	S	R	L	D
Template Known Secondary structure				T	T		.	.	.	.	T	T				T	T			T	T	S	S	S	S								T	T	S	T	T			S	S								S													B	T	T		S	B	T	T	B			S				B
Template Predicted Secondary structure							.	.	.	.
Template SS confidence
		157	.	.	160	.					.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.		.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		Q	L	A	L	V	D	Y	L	S	T	R	R	Y	D	A	H	L	R	R	L	R	R	Q	L	A	E	R	K	Q	R	A	W	Q	A	L	L	R	Y	L	P	A	E	V	K	I	H	H	N	D	S	G	Y	F	L	W	L	E	L	P	.	E	P	L	D	A	G	E	L	S	L	A	A	L	T	H	H	I	S	I	A
Query Conservation																																																													.
Alig confidence										.	.	.																												.	.																				.
Template Conservation										.	.	.																												.	.
Template Sequence		E	L	Q	A	G	F	L	R	.	.	.	V	K	L	K	Y	L	D	K	W	N	E	E	R	R	K	I	A	Q	K	Y	I	A	G	I	N	N	P	.	.	N	V	I	I	P	V	E	A	D	Y	A	K	H	V	W	Y	T	F	V	I	R	S	E	K	R	D	E	L	Q	K	Y	L	N	N	N	G	I	G	T	L
Template Known Secondary structure										.	.	.																										B	T	.	.	T	B	B						T	T						S							T	T											T	T	B			B
Template Predicted Secondary structure										.	.	.																												.	.
Template SS confidence
		233	.	.	.	.	.	.	240				.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.			.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		427	.	.	430	.	.	.	.	.	.	.																				.	.	440	.	.	.	.	.		.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Query Sequence		P	G	K	M	F	S	T	G	E	N	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	R	F	F	R	F	N	T	.	A	W	Q	W	G	E	R	E	E	Q	A	V	K	Q	L	G	K
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation
Template Sequence		I	H	Y	P	I	P	I	H	L	Q	Q	A	Y	K	D	L	G	F	K	T	G	N	F	P	I	A	E	K	I	A	N	E	I	L	S	I	P	I	W	Y	G	M	K	N	E	E	I	E	Y	V	I	D	K	I	N	A
Template Known Secondary structure			S		S	S		G	G	G	S	G	G	G	G	G	G				T	T	S	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions