Job Description P77730 Confidence 100.00% Date Thu Jan 5 12:32:10 GMT 2012 Rank 78 Aligned Residues 323 % Identity 19% Template c3fkdC_ PDB info PDB header:lyase Chain: C: PDB Molecule:l-threonine-o-3-phosphate decarboxylase; PDBTitle: the crystal structure of l-threonine-o-3-phosphate2 decarboxylase from porphyromonas gingivalis Resolution 2.50 Å

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		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	P	F	A	S	A	F	P	D	P	R	L	F	P	L	Q	Q	L	N	R	S	L	A	Q	V	S	K	T	A	T	A	M	S	V	I	E	N	L	P	P	G	N	A	E	L	R	Q	A	I	A	R	R	Y	A	L	Q	G	I	T	I	S	P	D	E	I	V	I	T	A	G	A	L	E	A	L	N	L	S	L
Query Conservation
Alig confidence							.										.	.	.	.	.	.																						.													.	.	.	.	.
Template Conservation							.										.	.	.	.	.	.																						.													.	.	.	.	.
Template Sequence		I	V	N	F	S	.	T	T	V	W	T	D	G	D	D	.	.	.	.	.	.	H	L	E	K	H	L	V	E	N	L	N	C	I	R	H	Y	P	E	P	D	A	.	G	T	L	R	Q	X	L	A	K	R	N	S	.	.	.	.	.	V	D	N	N	A	I	L	V	T	N	G	P	T	A	A	F	Y	Q	I	A
Template Known Secondary structure						S	.			S							.	.	.	.	.	.									T	G	G	G	G	G	S				T	T		.											T	T	.	.	.	.	.			G	G	G					S
Template Predicted Secondary structure							.										.	.	.	.	.	.																						.													.	.	.	.	.
Template SS confidence
		17	.	.	20	.		.	.	.	.	.	.	.	.	30							.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.						.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	V	T	E	P	G	D	W	V	I	V	E	N	P	C	F	Y	G	A	L	Q	A	L	E	R	L	R	L	K	A	L	S	V	A	T	D	V	K	E	G	I	D	L	Q	A	L	E	L	A	L	Q	E	Y	P	V	K	A	C	W	L	M	T	N	S	Q	N	P	L	G	F	T	L	T	P	Q	K	K	A	Q
Query Conservation
Alig confidence					.	.																																				.	.	.	.	.	.	.	.	.
Template Conservation					.	.																																				.	.	.	.	.	.	.	.	.
Template Sequence		Q	A	F	.	.	R	G	S	R	S	L	I	A	I	P	S	F	A	E	Y	E	D	A	C	R	X	Y	E	H	E	V	C	F	Y	P	S	N	E	D	I	.	.	.	.	.	.	.	.	.	G	E	A	D	F	S	N	X	D	F	C	W	L	C	N	P	N	N	P	D	G	R	L	L	Q	R	T	E	I	L	R
Template Known Secondary structure				T	.	.	T	T								S												T	T								T	T	S		G	.	.	.	.	.	.	.	.	.	G	G	S			T	T		S						S	S		T	T	T
Template Predicted Secondary structure					.	.																																				.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.										.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		L	V	A	L	L	N	Q	Y	N	V	T	L	I	E	D	D	V	Y	S	E	L	Y	F	G	R	E	K	P	L	P	A	K	A	W	D	R	H	D	G	V	L	H	C	S	S	F	S	K	C	L	V	.	P	G	F	R	I	G	W	V	A	A	G	K	H	A	R	K	I	Q	R	L	Q	L	M	S	T	L	S	T
Query Conservation																																																					.
Alig confidence			.	.																							.	.																									.
Template Conservation			.	.																							.	.
Template Sequence		L	.	.	L	N	D	H	P	D	T	T	F	V	L	D	Q	S	Y	V	S	F	T	T	E	E	.	.	V	I	R	P	A	D	I	K	G	R	K	N	L	V	X	V	Y	S	F	S	H	A	Y	G	I	P	G	L	R	I	G	Y	I	V	A	N	K	D	F	X	K	R	V	A	A	F	S	T	P	W	A	V	N
Template Known Secondary structure			.	.					T	T	S							T	T	G	G	G		S	S		.	.				G	G	G	G	T	T		S	S							S	T	T	T	S	S		G	G	G																	T	T			T	T		S
Template Predicted Secondary structure			.	.																							.	.
Template SS confidence
		154			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	P	M	Q	L	A	L	V	D	Y	L	S	T	R	R	Y	D	A	H	L	R	R	L	R	R	Q	L	A	E	R	K	Q	R	A	W	Q	A	L	L	R	Y	L	P	A	E	V	K	I	H	H	N	D	S	G	Y	F	L	W	L	E	L	P	E	P	L	D	A	G	E	L	S	L	A	A	L	T	H	H	I
Query Conservation
Alig confidence														.	.	.	.																											.	.	.
Template Conservation														.	.	.	.																											.	.	.
Template Sequence		A	L	A	I	E	A	A	K	F	I	L	I	.	.	.	.	H	P	A	Q	F	T	L	P	I	R	K	W	Q	R	N	T	V	D	F	I	T	A	L	N	R	L	.	.	.	D	G	V	E	V	H	P	S	G	T	T	F	F	L	L	R	L	K	K	G	T	A	A	E	L	K	K	Y	X	L	E	E	Y	N	X
Template Known Secondary structure														.	.	.	.																										S	.	.	.	T	T							S	S	S							S	S	S												T	T
Template Predicted Secondary structure														.	.	.	.																											.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.					.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.				.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	A	P	G	K	M	F	S	T	G	E	N	W	S	R	F	F	R	F	N	T	A	W	Q	W	G	E	R	E	E	Q	A	V	K	Q	L	G	K	L	I	Q	E
Query Conservation
Alig confidence														.	.										.	.
Template Conservation														.	.										.	.
Template Sequence		L	I	R	D	A	S	N	F	R	G	L	D	.	.	E	S	Y	V	R	I	T	T	Q	.	.	R	P	A	Q	N	Q	L	F	I	K	A	L	E	T	F	L	E	K
Template Known Secondary structure							T	T	S	T	T			.	.	T	T								.	.
Template Predicted Secondary structure														.	.										.	.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.			.	.	.	.	.	320	.	.	.			.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions