Job Description P77730 Confidence 99.84% Date Thu Jan 5 12:32:10 GMT 2012 Rank 186 Aligned Residues 305 % Identity 14% Template c3ecdC_ PDB info PDB header:transferase Chain: C: PDB Molecule:serine hydroxymethyltransferase 2; PDBTitle: crystal structure of serine hydroxymethyltransferase from burkholderia2 pseudomallei Resolution 1.60 Å

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		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	L	A	Q	V	S	K	T	A	T	A	M	S	V	I	E	N	L	P	P	G	N	A	E	L	R	Q	A	I	A	R	R	Y	A	L	Q	G	I	T	I	S	P	D	E	I	V	I	T	A	G	A	L	E	A	L	N	L	S	L	Q	A	V	T	E	P	G	D	W	V	I	V	E	N	P	C	F	Y	G	A
Query Conservation
Alig confidence																																							.	.	.	.	.	.																																			.	.	.
Template Conservation																																							.	.	.	.	.	.																																			.	.	.
Template Sequence		R	A	V	L	D	A	Q	G	S	V	L	T	N	K	Y	A	E	G	Y	D	E	V	E	A	L	A	I	E	R	V	K	R	L	F	N	A	G	.	.	.	.	.	.	H	A	N	V	Q	P	H	S	G	A	Q	A	N	G	A	V	M	L	A	L	A	K	P	G	D	T	V	L	G	M	S	L	F	N	.	.	.
Template Known Secondary structure									T	S	G	G	G	S	S		T	T																	T	T		S	.	.	.	.	.	.							S	S															T	T											.	.	.
Template Predicted Secondary structure																																							.	.	.	.	.	.																																			.	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.							.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		L	Q	A	L	E	R	L	R	L	K	A	L	S	V	A	T	D	V	K	E	G	.	I	D	L	Q	A	L	E	L	A	L	Q	E	Y	P	V	K	A	C	W	L	M	T	N	S	Q	N	P	L	G	F	T	L	T	P	Q	K	K	A	Q	L	V	A	L	L	N	Q	Y	N	V	T	L	I	E	D	D	V	Y	S
Query Conservation																							.
Alig confidence		.	.	.	.	.	.	.	.	.	.												.																							.	.	.									.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																																			.	.	.									.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	A	L	Q	Y	G	V	S	R	D	T	M	L	I	D	Y	D	Q	V	E	A	L	A	Q	Q	H	K	P	S	L	I	I	A	G	F	.	.	.	S	A	Y	P	R	K	L	D	.	.	.	F	A	R	F	R	A	I	A	D	S	V	G	A	K	L	M	V	D	M	A	H	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.						B		T	T	T		S	B															S							.	.	.	S			S	S				.	.	.											T	T								T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																			.	.	.									.	.	.
Template SS confidence
												146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.				180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	Y	F	G	R	E	K	P	L	P	A	K	A	W	D	R	H	D	G	V	L	H	C	S	S	F	S	K	C	L	V	P	G	F	R	I	G	W	V	A	A	G	K	H	A	R	K	I	Q	R	L	Q	L	M	S	T	L	S	T	S	S	P	M	Q	L	A	L	V	D	Y	L	S	T	R	R	Y	D	A	H
Query Conservation
Alig confidence																.	.	.	.														.																																													.	.	.	.
Template Conservation																.	.	.	.														.																																													.	.	.	.
Template Sequence		A	G	V	I	A	A	G	R	H	A	N	P	V	E	.	.	.	.	H	A	H	V	V	T	S	T	T	H	K	T	L	.	R	G	P	R	G	G	F	V	L	T	N	D	E	E	I	A	K	K	I	N	S	A	V	G	P	L	M	H	V	I	A	G	K	A	V	A	F	G	E	A	L	T	D	D	.	.	.	.
Template Known Secondary structure							T	T	S	S			G	G	G	.	.	.	.	T		S						S	S	G	G	G	.		S		S							S																														T	S			.	.	.	.
Template Predicted Secondary structure																.	.	.	.														.																																													.	.	.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.					.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.		.	.	.	400	.	.	.	.	.	.		.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.			.	.	.	.	.	.	.
Predicted Secondary structure																																			.											.																											.	.
Query SS confidence																																			.											.																											.	.
Query Sequence		L	R	R	L	R	R	Q	L	A	E	R	K	Q	R	A	W	Q	A	L	L	R	Y	L	P	A	E	V	K	I	H	H	N	D	.	S	G	Y	F	L	W	L	E	L	P	.	E	P	L	D	A	G	E	L	S	L	A	A	L	T	H	H	I	S	I	A	P	G	K	M	F	S	.	.	T	G	E	N	W	S	R
Query Conservation																																			.											.																											.	.
Alig confidence																								.	.	.									.											.																											.	.
Template Conservation																								.	.	.
Template Sequence		F	K	T	Y	I	D	R	V	L	A	N	A	Q	A	L	G	D	V	L	K	A	G	.	.	.	G	V	D	L	V	T	G	G	T	D	N	H	L	L	L	V	D	L	R	P	K	G	L	K	G	A	Q	V	E	Q	A	L	E	R	A	G	I	T	C	N	K	N	G	I	P	F	D	P	E	K	P	T	I	T	S
Template Known Secondary structure																							T	.	.	.	T				G	G	G	S		S	S	S							G	G	G	T													T	T									T	T		S	S		T	T	T		S
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.				.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
		440	.	.	.	.	.	.	.	.	.						450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.
Query SS confidence												.	.	.	.	.
Query Sequence		F	F	R	F	N	T	A	W	Q	W	.	.	.	.	.	G	E	R	E	E	Q	A	V	K	Q	L	G	K	L	I	Q	E
Query Conservation												.	.	.	.	.
Alig confidence												.	.	.	.	.
Template Conservation
Template Sequence		G	I	R	L	G	T	P	A	G	T	T	R	G	F	G	A	A	E	F	R	E	V	G	R	L	I	L	E	V	F	E	A
Template Known Secondary structure													T	T
Template Predicted Secondary structure
Template SS confidence
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions