Job Description P77730 Confidence 100.00% Date Thu Jan 5 12:32:10 GMT 2012 Rank 9 Aligned Residues 370 % Identity 16% Template c3d6kB_ PDB info PDB header:transferase Chain: B: PDB Molecule:putative aminotransferase; PDBTitle: the crystal structure of a putative aminotransferase from2 corynebacterium diphtheriae Resolution 2.00 Å

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		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.			.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.
Query SS confidence																																			.	.
Query Sequence		N	T	Y	I	F	D	M	L	Q	A	S	R	D	P	S	V	V	P	F	A	S	A	F	P	D	P	R	L	F	P	L	Q	Q	.	.	L	N	R	S	L	A	Q	V	S	K	T	A	T	A	M	S	V	I	E	N	L	P	P	G	N	A	E	L	R	Q	A	I	A	R	R	Y	A	L	Q	G	I	T	I	S	P
Query Conservation																																			.	.
Alig confidence																																			.	.																																					.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.
Template Sequence		E	E	V	T	A	K	Y	A	E	L	K	A	K	N	L	S	L	D	L	T	R	G	K	P	S	A	E	Q	L	D	L	S	N	D	L	L	S	L	P	G	G	D	F	R	T	K	D	G	V	D	C	R	N	Y	G	G	L	L	G	I	A	D	I	R	E	L	W	A	E	A	L	.	.	.	.	.	G	L	P	A
Template Known Secondary structure														T						S				S								T	T	G	G	G	G	G		S	T	T			B		T	T			B	T	T	S	S			S	S														.	.	.	.	.	T			G
Template Predicted Secondary structure																																																																									.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.						.	.	.	90
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.															.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	E	I	V	I	T	A	G	A	L	E	A	L	N	L	S	L	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	E	P	G	D	W	V	I	V	E	N	P	C	F	Y	G	A	L	Q	A	L	E	R	L	R	L	K	A	L	S	V	A	T	D	V	K	E	G	I	D	L	Q	A	L	E	L
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template Conservation																																																																							.
Template Sequence		D	L	V	V	A	Q	D	G	S	S	L	N	I	X	F	D	L	I	S	W	S	Y	T	W	G	N	N	D	S	S	R	P	W	S	A	E	E	K	V	K	W	L	C	P	V	P	G	Y	D	R	H	F	T	I	T	E	H	F	G	F	E	X	I	N	V	P	X	T	D	.	E	G	P	D	X	G	V	V	R	E
Template Known Secondary structure		G	G					S	S																			T	T		S	S		G	G	G	S	S									S												T	T										T	.	T
Template Predicted Secondary structure																																																																							.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.							.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																																									.																							.	.	.	.	.	.
Query SS confidence																																									.																							.	.	.	.	.	.
Query Sequence		A	L	Q	E	Y	P	V	K	A	C	W	L	M	T	N	S	Q	N	P	L	G	F	T	L	T	P	Q	K	K	A	Q	L	V	A	L	L	N	Q	Y	.	N	V	T	L	I	E	D	D	V	Y	S	E	L	Y	F	G	R	E	K	P	L	P	.	.	.	.	.	.	A	K	A	W	D	R	H	D	G	V	L	H
Query Conservation																																									.																							.	.	.	.	.	.
Alig confidence																																									.																							.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	K	D	P	Q	V	K	G	X	W	T	V	P	V	F	G	N	P	T	G	V	T	F	S	E	Q	T	C	R	E	L	A	E	X	S	T	A	A	P	D	F	R	I	V	W	D	N	A	Y	A	L	H	T	L	S	D	E	F	P	I	V	H	N	V	I	E	F	A	Q	A	A	G	N	P	N	R	F	W	F
Template Known Secondary structure			T	T	S	T	T									S	S		T	T	T																		S	S	T	T								T	T	T	T		B	S	S	S																T		T	T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.		.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.		.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure																						.																																.
Query SS confidence																						.																																.
Query Sequence		C	S	S	F	S	K	C	L	V	P	G	F	R	I	G	W	V	A	A	G	.	K	H	A	R	K	I	Q	R	L	Q	L	M	S	T	L	S	T	S	S	P	M	Q	L	A	L	V	D	Y	L	S	T	.	R	R	Y	D	A	H	L	R	R	L	R	R	Q	L	A	E	R	K	Q	R	A	W	Q	A	L	L	R
Query Conservation																						.																																.
Alig confidence																						.																																.
Template Conservation
Template Sequence		X	S	S	T	S	K	I	T	H	A	G	S	G	V	S	F	F	A	S	S	K	E	N	I	E	W	Y	A	S	H	A	N	V	R	G	I	G	P	N	K	L	N	Q	L	A	H	A	Q	F	F	G	D	V	A	G	L	K	A	H	X	L	K	H	A	A	S	L	A	P	K	F	E	R	V	L	E	I	L	D	S
Template Known Secondary structure					S	T	T	T	S		T	T	S	S																							S																S
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		385	.	.	.			.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.			.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure						.	.																																														.	.
Query SS confidence						.	.																																														.	.
Query Sequence		Y	L	P	A	.	.	E	V	K	I	H	H	N	D	S	G	Y	F	L	W	L	E	L	P	E	P	L	D	A	G	E	L	S	L	A	A	L	T	H	H	I	S	I	A	P	G	K	M	F	S	T	.	.	G	E	N	W	S	R	F	F	R	F	N	T	A	W	Q	W	G	E	R	E	E	Q	A	V	K	Q	L
Query Conservation						.	.																																														.	.
Alig confidence						.	.																						.																								.	.
Template Conservation																													.
Template Sequence		R	L	S	E	Y	G	V	A	K	W	T	S	P	T	G	G	Y	F	I	S	V	D	V	V	P	G	T	.	A	S	R	V	V	E	L	A	K	E	A	G	I	A	L	T	G	A	G	S	S	F	P	L	H	N	D	P	N	N	E	N	I	R	L	A	P	S	L	P	P	V	A	E	L	E	V	A	X	D	G	F
Template Known Secondary structure				G	G	G		S							S	B	S	S							S	T	T		.											T	T						T	T	T	T	S	G	G	G			T	T	S								S	S	S
Template Predicted Secondary structure																													.
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.		.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
		461	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	L	I	Q	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	C	V	L	X
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		409	410	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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