Job Description P77730 Confidence 99.94% Date Thu Jan 5 12:32:10 GMT 2012 Rank 121 Aligned Residues 327 % Identity 14% Template c3caiA_ PDB info PDB header:transferase Chain: A: PDB Molecule:possible aminotransferase; PDBTitle: crystal structure of mycobacterium tuberculosis rv3778c2 protein Resolution 1.80 Å

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		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.						.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.
Predicted Secondary structure																			.	.	.	.	.																																																						.	.	.
Query SS confidence																			.	.	.	.	.																																																						.	.	.
Query Sequence		F	P	L	Q	Q	L	N	R	S	L	A	Q	V	S	K	T	A	.	.	.	.	.	T	A	M	S	V	I	E	N	L	P	P	G	N	A	E	L	R	Q	A	I	A	R	R	Y	A	L	Q	G	I	T	I	S	P	D	E	I	V	I	T	A	G	A	L	E	A	L	N	L	S	L	Q	A	V	.	.	.	T	E
Query Conservation																			.	.	.	.	.																																																						.	.	.
Alig confidence																			.	.	.	.	.																										.	.	.	.	.																								.	.	.
Template Conservation																																																	.	.	.	.	.
Template Sequence		L	I	P	D	S	V	A	T	T	V	S	T	A	F	R	R	S	G	A	S	T	V	G	A	H	P	S	A	R	R	S	A	A	V	L	D	A	A	R	E	A	V	A	D	L	V	N	.	.	.	.	.	A	D	P	G	G	V	V	L	G	A	D	R	A	V	L	L	S	L	L	A	E	A	S	S	S	R	A	G
Template Known Secondary structure																				S	S	S		S	S	S																						T	.	.	.	.	.			G	G	G					S													T	G	G	G	G	B
Template Predicted Secondary structure																																																	.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.						.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.					.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure															.	.	.	.
Query SS confidence															.	.	.	.
Query Sequence		P	G	D	W	V	I	V	E	N	P	C	F	Y	.	.	.	.	G	A	L	Q	A	L	E	R	L	R	L	K	A	L	S	V	A	T	D	V	K	E	G	I	D	L	Q	A	L	E	L	A	L	Q	E	Y	P	V	K	A	C	W	L	M	T	N	S	Q	N	P	L	G	F	T	L	T	P	Q	K	K	A	Q	L
Query Conservation															.	.	.	.
Alig confidence															.	.	.	.																					.																																				.	.	.
Template Conservation																																							.																																				.	.	.
Template Sequence		L	G	Y	E	V	I	V	S	R	L	D	D	E	A	N	I	A	P	W	L	R	A	A	H	R	Y	G	A	K	V	K	W	A	E	V	D	I	.	E	T	G	E	L	P	T	W	Q	W	E	S	L	I	S	K	S	T	R	L	V	A	V	N	S	A	S	G	T	L	G	G	V	T	D	.	.	.	L	R	A	M
Template Known Secondary structure		T	T							T	T	S		G	G	G	T											B										T	.	T	T					G	G	G							T	T								S	B		T	T	T		B	B			.	.	.
Template Predicted Secondary structure																																							.																																				.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.				.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		V	A	L	L	N	Q	Y	N	V	T	L	I	E	D	D	V	Y	S	E	L	Y	F	G	R	E	K	P	L	P	A	K	A	W	D	R	H	D	G	V	L	H	C	S	S	F	S	K	C	L	V	P	G	F	R	I	G	W	V	A	A	G	K	H	A	R	K	I	Q	R	L	Q	L	M	S	T	L	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																									.	.	.	.	.	.	.																																															.	.	.	.
Template Conservation																									.	.	.	.	.	.	.
Template Sequence		T	K	L	V	H	D	V	G	A	L	V	V	V	D	H	S	A	A	A	P	Y	R	L	.	.	.	.	.	.	.	L	D	I	R	E	T	D	A	D	V	V	T	V	N	A	H	A	W	G	G	P	P	I	G	A	M	V	F	R	D	P	S	V	M	N	S	F	G	S	V	S	T	N	P	Y	A	T	G	P	A
Template Known Secondary structure								T	T								T	T	T	T	T	T			.	.	.	.	.	.	.									S						G	G	G	G	T	S		S							S							T	S					S		T	T			G	G	G
Template Predicted Secondary structure																									.	.	.	.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.								.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
							342	.	.	.	.	.	.	.	350	.	.	.	.	.														.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.			.	.	400	.
Predicted Secondary structure		.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.
Query SS confidence		.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.
Query Sequence		.	.	.	.	.	S	T	S	S	P	M	Q	L	A	L	V	D	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	R	R	Y	D	A	H	L	R	R	L	R	R	Q	L	A	E	R	K	Q	R	A	W	Q	A	L	L	R	Y	L	P	A	E	V	K	I	H	H	N	D	S	.	.	G	Y	F	L
Query Conservation		.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.
Alig confidence		.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.											.	.
Template Conservation																																																																.	.
Template Sequence		R	L	E	I	G	V	H	Q	F	G	L	L	A	G	V	V	A	S	I	E	Y	L	A	A	L	D	E	S	A	R	G	S	R	R	E	R	L	A	V	S	M	Q	S	A	D	A	Y	L	N	R	V	F	D	Y	L	M	V	S	L	R	S	L	.	.	P	L	V	M	L	I	G	R	P	E	A	Q	I	P	V	V
Template Known Secondary structure		G	G			S																			T	S	S	T	T			S	S																													T		.	.	T	T								S	S	B		S
Template Predicted Secondary structure																																																																.	.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.			.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.						.	.	.	.	.	.	440	.	.	.	.	.	.		.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure																																		.	.	.	.	.														.
Query SS confidence																																		.	.	.	.	.														.
Query Sequence		W	L	E	L	P	E	P	L	D	A	G	E	L	S	L	A	A	L	T	H	H	I	S	I	A	P	G	K	M	F	S	T	.	.	.	.	.	G	E	N	W	S	R	F	F	R	F	N	T	A	.	W	Q	W	G	E	R	E	E	Q	A	V	K	Q	L	G	K	L
Query Conservation																																		.	.	.	.	.														.
Alig confidence							.																											.	.	.	.	.														.
Template Conservation							.
Template Sequence		S	F	A	V	H	.	K	V	P	A	D	R	V	V	Q	R	L	A	D	N	G	I	L	A	I	A	N	T	G	S	R	V	L	D	V	L	G	V	N	D	V	G	G	A	V	T	V	G	L	A	H	Y	S	T	M	A	E	V	D	Q	L	V	R	A	L	A	S	L
Template Known Secondary structure						T	.	T	B												T	T								S								T	T	T	T	T	T									T	T															T
Template Predicted Secondary structure							.
Template SS confidence
		331	.	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions