Job Description P77730 Confidence 100.00% Date Thu Jan 5 12:32:10 GMT 2012 Rank 55 Aligned Residues 363 % Identity 20% Template c2x5dD_ PDB info PDB header:transferase Chain: D: PDB Molecule:probable aminotransferase; PDBTitle: crystal structure of a probable aminotransferase from2 pseudomonas aeruginosa Resolution 2.25 Å

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.									.
Query SS confidence																																																																								.									.
Query Sequence		Y	I	F	D	M	L	Q	A	S	R	D	P	S	V	V	P	F	A	S	A	F	P	D	P	R	L	F	P	L	Q	Q	L	N	R	S	L	A	Q	V	S	K	T	A	T	A	M	S	V	I	E	N	L	P	P	G	N	A	E	L	R	Q	A	I	A	R	R	Y	A	L	Q	.	G	I	T	I	S	P	D	E	.
Query Conservation																																																																								.									.
Alig confidence																									.	.																			.	.																										.									.
Template Conservation																									.	.																			.	.
Template Sequence		A	E	L	K	M	A	A	R	R	R	G	E	D	I	I	D	L	S	M	G	N	P	D	.	.	G	P	T	P	P	H	I	V	E	K	L	C	T	V	A	Q	R	E	.	.	D	T	H	G	Y	S	T	S	R	G	I	P	R	L	R	R	A	I	S	H	W	Y	R	D	R	Y	D	V	Q	I	D	P	E	S	E
Template Known Secondary structure												T							S						.	.	S																S	T	.	.	T			S				T	T																							T	T	T	S
Template Predicted Secondary structure																									.	.																			.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	I	T	A	G	A	L	E	A	L	N	L	S	L	Q	A	V	T	E	P	G	D	W	V	I	V	E	N	P	C	F	Y	G	A	L	Q	A	L	E	R	L	R	L	K	A	L	S	V	A	T	D	V	K	E	G	I	D	L	Q	A	L	E	L	A	L	Q	E	Y	P	V	K	A	C	W	L	M	T	N	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	V	T	I	G	S	K	E	G	L	A	H	L	M	L	A	T	L	D	H	G	D	T	I	L	V	P	N	P	S	Y	P	I	H	I	Y	G	A	V	I	A	G	A	Q	V	R	S	V	P	L	V	P	G	I	D	F	F	N	E	L	E	R	A	I	R	E	S	I	P	K	P	R	M	M	I	L	G	F	P
Template Known Secondary structure						S	S															T	T								S			T									T	T									S	T	T	S												T	S	S	S			S						S	S
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure																																																			.																		.												.
Query SS confidence																																																			.																		.												.
Query Sequence		Q	N	P	L	G	F	T	L	T	P	Q	K	K	A	Q	L	V	A	L	L	N	Q	Y	N	V	T	L	I	E	D	D	V	Y	S	E	L	Y	F	G	R	E	K	P	L	P	A	K	A	W	.	D	R	H	D	G	V	L	H	C	S	S	F	S	K	C	L	V	.	P	G	F	R	I	G	W	V	A	A	G	.
Query Conservation																																																			.																		.												.
Alig confidence																																																			.																		.												.
Template Conservation
Template Sequence		S	N	P	T	A	Q	C	V	E	L	D	F	F	E	R	V	V	A	L	A	K	Q	Y	D	V	M	V	V	H	D	L	A	Y	A	D	I	V	Y	D	G	W	K	A	P	S	I	M	Q	V	P	G	A	K	D	I	A	V	E	F	F	T	L	S	K	S	Y	N	M	A	G	W	R	I	G	F	M	V	G	N	P
Template Known Secondary structure			T	T	T																				T								T	T	T	T		B		T	T						G	G	G	S	T	T	G	G	G	T							S	T	T	T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	H	A	R	K	I	Q	R	L	Q	L	M	S	T	L	S	T	S	S	P	M	Q	L	A	L	V	D	Y	L	S	T	R	R	Y	D	A	H	L	R	R	L	R	R	Q	L	A	E	R	K	Q	R	A	W	Q	A	L	L	R	Y	L	P	A	E	V	K	I	H	H	N	D	S	G	Y	F	L	W	L	E	L	P
Query Conservation
Alig confidence																															.	.																													.	.	.
Template Conservation																															.	.																													.	.	.
Template Sequence		E	L	V	S	A	L	A	R	I	K	S	Y	H	D	Y	G	T	F	T	P	L	Q	V	A	A	I	A	A	L	.	.	E	G	D	Q	Q	C	V	R	D	I	A	R	Q	Y	Q	Q	R	R	D	V	L	V	K	G	L	R	E	A	.	.	.	G	W	M	V	E	N	P	K	A	S	M	Y	V	W	A	K	I	P
Template Known Secondary structure													T	T		S	S	S													.	.	S	S																										T	.	.	.	T							S	B	S	S
Template Predicted Secondary structure																															.	.																													.	.	.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.			290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.				.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		407				.	.	410	.	.	.	.	.	.	.	.		.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure			.	.	.												.
Query SS confidence			.	.	.												.
Query Sequence		E	.	.	.	P	L	D	A	G	E	L	S	L	A	A	.	L	T	H	H	I	S	I	A	P	G	K	M	F	S	T	G	E	N	W	S	R	F	F	R	F	N	T	A	W	Q	W	G	E	R	E	E	Q	A	V	K	Q	L	G	K	L	I	Q	E
Query Conservation			.	.	.												.
Alig confidence			.	.	.												.																		.	.										.
Template Conservation																																			.	.										.
Template Sequence		E	P	Y	A	H	L	G	S	L	E	F	A	K	K	L	L	Q	D	A	K	V	S	V	S	P	G	I	G	F	G	D	Y	G	.	.	D	D	H	V	R	F	A	L	I	.	E	N	R	D	R	L	R	Q	A	V	R	G	I	K	A	M	F	R	A
Template Known Secondary structure						T	T																				G	G	G	G		G	G	G	.	.	T	T								.	S
Template Predicted Secondary structure																																			.	.										.
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.			.	370	.	.	.	.	.	.	.		.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions