Job Description P77730 Confidence 99.94% Date Thu Jan 5 12:32:10 GMT 2012 Rank 109 Aligned Residues 348 % Identity 14% Template c2po3B_ PDB info PDB header:transferase Chain: B: PDB Molecule:4-dehydrase; PDBTitle: crystal structure analysis of desi in the presence of its2 tdp-sugar product Resolution 2.10 Å

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		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		M	L	Q	A	S	R	D	P	S	V	V	P	F	A	S	A	F	P	.	.	D	P	R	L	F	P	L	Q	Q	L	N	R	S	L	A	Q	V	S	K	T	A	T	A	M	S	V	I	E	N	L	P	P	G	N	A	E	L	R	Q	A	I	A	R	R	Y	A	L	Q	G	I	T	I	S	P	D	E	I	V	I	T
Query Conservation																				.	.
Alig confidence																				.	.																					.	.	.	.																								.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.																								.	.	.	.	.	.	.
Template Sequence		L	S	D	L	A	F	F	G	G	P	A	A	F	D	Q	P	L	L	V	G	R	P	N	R	I	D	R	A	R	L	Y	E	R	L	D	R	A	L	D	S	.	.	.	.	Q	W	L	S	N	G	G	P	L	V	R	E	F	E	E	R	V	A	G	L	A	G	V	.	.	.	.	.	.	.	R	H	A	V	A	T
Template Known Secondary structure		G	G	G	S	G	G	G	T	S			S		S	S				T	T																					.	.	.	.	T			S	S	S																T	S	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																										.	.	.	.																								.	.	.	.	.	.	.
Template SS confidence
		2005	.	.	.	.	2010	.	.	.	.	.	.	.	.	.	2020	.	.	.	.	.	.	.	.	.	2030	.	.	.	.	.	.	.	.	.	2040	.	.	.	.					.	.	.	.	.	2050	.	.	.	.	.	.	.	.	.	2060	.	.	.	.	.	.	.								.	.	2070	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	A	L	E	A	L	N	L	S	L	Q	A	V	T	E	P	G	D	W	V	I	V	E	N	P	C	F	Y	G	A	L	Q	A	L	E	R	L	R	L	K	A	L	S	V	A	T	D	V	K	E	G	I	D	L	Q	A	L	E	L	A	L	Q	E	Y	P	V	K	A	C	W	L	M	T	N	S	Q	N	P	L
Query Conservation
Alig confidence																.																																																											.	.	.	.
Template Conservation																.																																																											.	.	.	.
Template Sequence		C	N	A	T	A	G	L	Q	L	L	A	H	A	A	.	G	L	T	G	E	V	I	M	P	S	M	T	F	A	A	T	P	H	A	L	R	W	I	G	L	T	P	V	F	A	D	I	D	P	D	T	G	N	L	D	P	D	Q	V	A	A	A	V	T	P	R	T	S	A	V	V	G	V	.	.	.	.	H	L	W
Template Known Secondary structure		S														.	T			S						S	S	S		T									T	T								B		T	T	T	S	S	B		S	T	T							T	T								.	.	.	.		G	G
Template Predicted Secondary structure																.																																																											.	.	.	.
Template SS confidence
		2074	.	.	.	.	.	2080	.	.	.	.	.	.	.		.	.	2090	.	.	.	.	.	.	.	.	.	2100	.	.	.	.	.	.	.	.	.	2110	.	.	.	.	.	.	.	.	.	2120	.	.	.	.	.	.	.	.	.	2130	.	.	.	.	.	.	.	.	.	2140	.	.	.	.	.					.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	T	L	T	P	Q	K	K	A	Q	L	V	A	L	L	N	Q	Y	N	V	T	L	I	E	D	D	V	Y	S	E	L	Y	F	G	R	E	K	P	L	P	A	K	A	W	D	R	H	D	G	V	L	H	C	S	S	F	S	K	C	L	V	P	G	F	R	I	G	W	V	A	A	G	K	H	A	R	K	I	Q
Query Conservation
Alig confidence							.	.	.																																		.	.	.	.
Template Conservation							.	.	.																																		.	.	.	.
Template Sequence		G	R	P	C	A	.	.	.	A	D	Q	L	R	K	V	A	D	E	H	G	L	R	L	Y	F	D	A	A	H	A	L	G	C	A	V	D	G	R	P	A	G	.	.	.	.	S	L	G	D	A	E	V	F	S	F	H	A	T	K	A	V	N	A	F	E	G	G	A	V	V	T	D	D	A	D	L	A	A	R	I
Template Known Secondary structure		G					.	.	.												T								T	T		T	T				T	T			T	T	.	.	.	.	S	S	S	S	S							T	T	S	S	S			S	S							S
Template Predicted Secondary structure							.	.	.																																		.	.	.	.
Template SS confidence
		2149	2150	.	.	.				.	.	.	.	.	.	2160	.	.	.	.	.	.	.	.	.	2170	.	.	.	.	.	.	.	.	.	2180	.	.	.	.	.	.					.	.	.	2190	.	.	.	.	.	.	.	.	.	2200	.	.	.	.	.	.	.	.	.	2210	.	.	.	.	.	.	.	.	.	2220	.
		334	.	.	.											.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.
Query Sequence		R	L	Q	L	.	.	.	.	.	.	.	.	.	.	M	S	T	L	S	T	S	S	P	M	Q	L	A	L	V	D	Y	L	S	T	R	R	Y	D	A	H	L	R	R	L	R	R	Q	L	A	E	R	K	Q	R	A	W	Q	A	L	L	R	Y	L	P	A	E	V	K	I	H	H	N	D	S	G	Y	F	L	W	L
Query Conservation						.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	A	L	H	N	F	G	F	D	L	P	G	G	S	P	A	G	G	T	N	A	K	M	S	E	A	A	A	A	M	G	L	T	S	L	D	A	F	P	E	V	I	D	R	N	R	R	N	H	A	A	Y	R	E	H	L	A	D	L	P	G	V	L	V	A	D	H	D	R	H	G	L	N	N	H	Q	Y	V	I	V
Template Known Secondary structure					T	B	T	T	T	T		T	T			T	T				B		B																																		T		S		T	T						G	G	G	G	S	B
Template Predicted Secondary structure
Template SS confidence
		2222	.	.	.	.	.	.	.	2230	.	.	.	.	.	.	.	.	.	2240	.	.	.	.	.	.	.	.	.	2250	.	.	.	.	.	.	.	.	.	2260	.	.	.	.	.	.	.	.	.	2270	.	.	.	.	.	.	.	.	.	2280	.	.	.	.	.	.	.	.	.	2290	.	.	.	.	.	.	.	.	.	2300	.
		404	.	.	.				.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.																		.	.	440	.	.	.	.	.		.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
Predicted Secondary structure						.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Query SS confidence						.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Query Sequence		E	L	P	E	.	.	.	P	L	D	A	G	E	L	S	L	A	A	L	T	H	H	I	S	I	A	P	G	K	M	F	S	T	G	E	N	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	R	F	F	R	F	N	T	.	A	W	Q	W	G	E	R	E	E	Q	A	V	K	Q	L	G	K
Query Conservation						.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Alig confidence						.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation
Template Sequence		E	I	D	E	A	T	T	G	I	H	R	D	L	V	M	E	V	L	K	A	E	G	V	H	T	R	A	Y	F	S	P	G	C	H	E	L	E	P	Y	R	G	Q	P	H	A	P	L	P	H	T	E	R	L	A	A	R	V	L	S	L	P	T	G	T	A	I	G	D	D	D	I	R	R	V	A	D	L	L	R	L
Template Known Secondary structure									S	S												T	T				B		T	T		S		G	G	G	S	T	T	T	T	T	S													T	T							S	T	T
Template Predicted Secondary structure
Template SS confidence
		2302	.	.	.	.	.	.	.	2310	.	.	.	.	.	.	.	.	.	2320	.	.	.	.	.	.	.	.	.	2330	.	.	.	.	.	.	.	.	.	2340	.	.	.	.	.	.	.	.	.	2350	.	.	.	.	.	.	.	.	.	2360	.	.	.	.	.	.	.	.	.	2370	.	.	.	.	.	.	.	.	.	2380	.
		463	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	Q	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	A	T	R
Template Known Secondary structure					S
Template Predicted Secondary structure
Template SS confidence
		2382	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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