Job Description P77730 Confidence 99.93% Date Thu Jan 5 12:32:10 GMT 2012 Rank 128 Aligned Residues 320 % Identity 14% Template c2ogeC_ PDB info PDB header:transferase Chain: C: PDB Molecule:transaminase; PDBTitle: x-ray structure of s. venezuelae desv in its internal2 aldimine form Resolution 2.05 Å

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		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		Q	Q	L	N	R	S	L	A	Q	V	S	K	T	A	T	A	M	S	V	I	E	N	L	P	P	G	N	A	E	L	R	Q	A	I	A	R	R	Y	A	L	Q	G	I	T	I	S	P	D	E	I	V	I	T	A	G	A	L	E	A	L	N	L	S	L	Q	A	V	.	T	E	P	G	D	W	V	I	V	E	N	P
Query Conservation																																																																					.
Alig confidence																	.	.	.	.	.																					.	.	.	.	.	.	.																					.
Template Conservation																	.	.	.	.	.																					.	.	.	.	.	.	.
Template Sequence		A	E	T	D	A	A	I	A	R	V	L	D	S	G	R	.	.	.	.	.	Y	L	L	G	P	E	L	E	G	F	E	A	E	F	A	A	Y	C	E	T	.	.	.	.	.	.	.	D	H	A	V	G	V	N	S	G	M	D	A	L	Q	L	A	L	R	G	L	G	I	G	P	G	D	E	V	I	V	P	S	H
Template Known Secondary structure															T		.	.	.	.	.		S	S	S														T	T	S	.	.	.	.	.	.	.	S						S													T	T			T	T							S	S
Template Predicted Secondary structure																	.	.	.	.	.																					.	.	.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.						.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.								.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	F	Y	G	A	L	Q	A	L	E	R	L	R	L	K	A	L	S	V	A	T	D	V	K	E	G	I	D	L	Q	A	L	E	L	A	L	Q	E	Y	P	V	K	A	C	W	L	M	T	N	S	Q	N	P	L	G	F	T	L	T	P	Q	K	K	A	Q	L	V	A	L	L	N	Q	Y	N	V	T	L	I	E	D
Query Conservation
Alig confidence																											.	.																							.	.									.	.	.
Template Conservation																											.	.																							.	.									.	.	.
Template Sequence		T	Y	I	A	S	W	L	A	V	S	A	T	G	A	T	P	V	P	V	E	P	H	E	D	H	.	.	P	T	L	D	P	L	L	V	E	K	A	I	T	P	R	T	R	A	L	L	P	V	.	.	H	L	Y	G	H	P	A	D	.	.	.	M	D	A	L	R	E	L	A	D	R	H	G	L	H	I	V	E	D
Template Known Secondary structure		S										T	T	T								B		S	S	S	.	.	S	S	B						G	G	G			S	S							B	.	.		G	G	G					.	.	.											T	T
Template Predicted Secondary structure																											.	.																							.	.									.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.				.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.											340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	Y	S	E	L	Y	F	G	R	E	K	P	L	P	A	K	A	W	D	R	H	D	G	V	L	H	C	S	S	F	S	K	C	L	V	P	G	F	R	I	G	W	V	A	A	G	K	H	A	R	K	I	Q	R	L	Q	L	M	S	.	.	.	.	.	.	.	.	.	.	T	L	S	T	S	S	P	M	Q	L
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.
Template Sequence		A	A	Q	A	H	G	A	R	Y	R	G	R	R	I	G	.	.	.	.	A	G	S	S	V	A	A	F	S	F	Y	P	G	N	L	G	C	F	G	D	G	G	A	V	V	T	G	D	P	E	L	A	E	R	L	R	M	L	R	N	Y	G	S	R	Q	K	Y	S	H	E	T	K	G	T	N	S	R	L	D	E	M
Template Known Secondary structure			T	T		T	T				T	T			T	T	.	.	.	.		T	T															S	S								S												T	B	T	T		S	B	T	T	B		S	S				B
Template Predicted Secondary structure																	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.					180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	V	D	Y	L	S	T	R	R	Y	D	A	H	L	R	R	L	R	R	Q	L	A	E	R	K	Q	R	A	W	Q	A	L	L	R	Y	L	P	A	E	V	K	I	H	H	N	D	S	G	Y	F	L	W	L	E	L	P	E	P	L	D	A	G	E	L	S	L	A	A	L	T	H	H	I	S	I	A	P	G	K
Query Conservation
Alig confidence								.	.	.
Template Conservation								.	.	.
Template Sequence		Q	A	A	V	L	R	.	.	.	I	R	L	A	H	L	D	S	W	N	G	R	R	S	A	L	A	A	E	Y	L	S	G	L	A	G	L	P	G	I	G	L	P	V	T	A	P	D	T	D	P	V	W	H	L	F	T	V	R	T	E	R	R	D	E	L	R	S	H	L	D	A	R	G	I	D	T	L	T	H	Y
Template Known Secondary structure								.	.	.					T																			T	T	T		T	T	S	B						T	T						S							T	T											T	T	B			B		S
Template Predicted Secondary structure								.	.	.
Template SS confidence
		242	.	.	.	.	.				.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		430	.	.	.	.	.	.	.																				.	.	440	.	.	.	.	.		.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Query Sequence		M	F	S	T	G	E	N	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	R	F	F	R	F	N	T	.	A	W	Q	W	G	E	R	E	E	Q	A	V	K	Q	L	G	K	L	I	Q	E
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation
Template Sequence		P	V	P	V	H	L	S	P	A	Y	A	G	E	A	P	P	E	G	S	L	P	R	A	E	S	F	A	R	Q	V	L	S	L	P	I	G	P	H	L	E	R	P	Q	A	L	R	V	I	D	A	V	R	E	W	A	E	R
Template Known Secondary structure		S	S		G	G	G	S	G	G	G	T	T	T	S			T	T	S																	S	T	T
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions