Job Description P77730 Confidence 99.75% Date Thu Jan 5 12:32:10 GMT 2012 Rank 218 Aligned Residues 283 % Identity 17% Template c2nmpC_ PDB info PDB header:lyase Chain: C: PDB Molecule:cystathionine gamma-lyase; PDBTitle: crystal structure of human cystathionine gamma lyase Resolution 2.60 Å

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		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.					.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.
Query SS confidence																																																									.	.	.	.
Query Sequence		E	L	R	Q	A	I	A	R	R	Y	A	L	Q	G	I	T	I	S	P	D	E	I	V	I	T	A	G	A	L	E	A	L	N	L	S	L	Q	A	V	T	E	P	G	D	W	V	I	V	E	N	P	C	F	Y	G	.	.	.	.	A	L	Q	A	L	E	R	L	R	L	K	A	L	S	V	A	T	D	V	K	E
Query Conservation																																																									.	.	.	.
Alig confidence													.	.	.	.	.	.	.															.																							.	.	.	.																			.	.	.
Template Conservation													.	.	.	.	.	.	.															.																																													.	.	.
Template Sequence		C	L	E	K	A	V	A	A	L	D	G	.	.	.	.	.	.	.	A	K	Y	C	L	A	F	A	S	G	L	A	A	T	.	V	T	I	T	H	L	L	K	A	G	D	Q	I	I	C	M	D	D	V	Y	G	G	T	N	R	Y	F	R	Q	V	A	S	E	F	G	L	K	I	S	F	V	D	C	S	.	.	.
Template Known Secondary structure											T	T	.	.	.	.	.	.	.		S						S	S						.					T	T	S		T	T							S	S												T	G	G	G	T	T									S	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.															.																																													.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80								.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		G	I	D	L	Q	A	L	E	L	A	L	Q	E	Y	P	V	K	A	C	W	L	M	T	N	S	Q	N	P	L	G	F	T	L	T	P	Q	K	K	A	Q	L	V	A	L	L	N	Q	Y	N	.	V	T	L	I	E	D	D	V	Y	S	E	L	Y	F	G	R	E	K	P	L	P	A	K	A	W	D	R	H	D	G
Query Conservation																																																			.
Alig confidence		.	.																							.	.									.	.	.													.																						.	.	.	.	.	.
Template Conservation		.	.																							.	.									.	.	.																																			.	.	.	.	.	.
Template Sequence		.	.	K	I	K	L	L	E	A	A	I	T	P	E	T	K	L	V	W	I	E	T	P	T	.	.	N	P	T	Q	K	V	I	D	.	.	.	I	E	G	C	A	H	I	V	H	K	H	G	D	I	I	L	V	V	D	N	T	F	M	S	P	Y	F	Q	R	P	L	A	L	G	.	.	.	.	.	.	A	D	I
Template Known Secondary structure		.	.	S										T	T								S	S		.	.	T	T	T						.	.	.									T	T	S	S	S								T	T	T							T	T	T	T	T	.	.	.	.	.	.		S
Template Predicted Secondary structure		.	.																							.	.									.	.	.																																			.	.	.	.	.	.
Template SS confidence
				139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.				.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.							.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.			.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		V	L	H	C	S	S	F	S	K	C	L	V	P	G	F	R	I	G	W	V	A	A	G	.	.	K	H	A	R	K	I	Q	R	L	Q	L	M	S	T	L	S	T	S	S	P	M	Q	L	A	L	V	D	Y	L	S	T	R	R	Y	D	A	H	L	R	R	L	R	R	Q	L	A	E	R	K	Q	R	A	W	Q	A
Query Conservation																									.	.
Alig confidence																									.	.																																.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.
Template Sequence		S	M	Y	S	A	T	K	Y	M	N	G	H	S	D	V	V	M	G	L	V	S	V	N	C	E	S	L	H	N	R	L	R	F	L	Q	N	S	L	G	A	V	P	S	P	I	D	C	Y	L	C	N	R	G	L	K	T	.	.	.	.	.	.	L	H	V	R	M	E	K	H	F	K	N	G	M	A	V	A	Q	F
Template Known Secondary structure						T	T	T	T	T	T		S	S	S																																									T	T	.	.	.	.	.	.
Template Predicted Secondary structure																																																										.	.	.	.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.							.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.																		.	.	400	.	.	.	.	.	.	.	.	.		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																													.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																													.	.	.	.	.	.
Query Sequence		L	L	R	Y	L	P	A	E	V	K	I	H	H	N	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	F	L	W	L	E	L	P	E	P	L	.	D	A	G	E	L	S	L	A	A	L	T	H	H	I	S	I	A	P	G	K	M	F	S	T	G	E	N	W	.	.	.	.	.	.
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																													.	.	.	.	.	.
Alig confidence						.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																													.	.	.	.	.	.
Template Conservation						.	.
Template Sequence		L	E	S	N	.	.	P	W	V	E	K	V	I	Y	P	G	L	P	S	H	P	Q	H	E	L	V	K	R	Q	C	T	G	C	T	G	M	V	T	F	Y	I	K	G	T	L	Q	H	A	E	I	F	L	K	N	L	K	L	F	T	L	A	E	S	L	G	G	F	E	S	L	A	E	L	P	A	I	M	T	H	A
Template Known Secondary structure				T		.	.	T	T							T	T	S	T	T	S	T	T									S	S			S							S	S													S	S	S				S			S	S	S	S						G	G	G	T	T	T	T
Template Predicted Secondary structure						.	.
Template SS confidence
		280	.	.	.			.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
															438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	S	R	F	F	R	F	N	T	A	W	Q	W	G	E	R	E	E	Q	A	V	K	Q	L	G	K	L	I	Q	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation																															.	.	.
Template Sequence		S	V	L	K	N	D	R	D	V	L	G	I	S	D	T	L	I	R	L	S	V	G	L	E	D	E	E	D	L	.	.	.	L	E	D	L	D	Q	A	L	K	A
Template Known Secondary structure		T	S									T			T	T								S	S						.	.	.
Template Predicted Secondary structure																															.	.	.
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.				.	.	.	390	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions