Job Description P77730 Confidence 99.90% Date Thu Jan 5 12:32:10 GMT 2012 Rank 153 Aligned Residues 339 % Identity 13% Template c1oatB_ PDB info PDB header:aminotransferase Chain: B: PDB Molecule:ornithine aminotransferase; PDBTitle: ornithine aminotransferase Resolution 2.50 Å

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		105	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		V	V	P	F	A	S	A	F	P	D	P	R	L	F	.	P	L	Q	Q	L	N	R	S	L	A	Q	V	S	K	T	A	T	A	M	S	V	I	E	N	L	P	P	G	N	A	E	L	R	Q	A	I	A	R	R	Y	A	L	Q	G	I	T	I	S	P	D	E	I	V	I	T	A	G	A	L	E	A	L	N	L	S
Query Conservation																.
Alig confidence																.																.	.	.	.	.																								.	.	.
Template Conservation																																.	.	.	.	.																								.	.	.
Template Sequence		Y	F	D	F	L	S	S	Y	S	A	V	N	Q	G	H	C	H	P	K	I	V	N	A	L	K	S	Q	V	D	K	.	.	.	.	.	L	T	L	T	S	R	A	F	Y	N	N	V	L	G	E	Y	E	E	Y	I	T	K	L	.	.	.	F	N	Y	H	K	V	L	P	M	N	T	G	V	E	A	G	E	T	A
Template Known Secondary structure					S	S					T		T	T		B	T													T	T	.	.	.	.	.		S				T	T	S			S	S												.	.	.		T		S						S	S
Template Predicted Secondary structure																																.	.	.	.	.																								.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.						.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130				.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		184	.	.											.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.									.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Query Sequence		L	Q	A	.	.	.	.	.	.	.	.	.	.	V	T	E	P	G	D	W	V	I	V	E	N	P	C	F	Y	G	A	L	Q	A	.	.	.	.	.	.	.	.	L	E	R	L	R	L	K	A	L	S	V	A	T	D	V	K	E	G	I	D	L	Q	A	L	E	L	A	L	Q	E	Y	P	V	K	A	C	W	L
Query Conservation					.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	K	L	A	R	K	W	G	Y	T	V	K	G	I	Q	K	Y	K	A	K	I	V	F	A	A	G	N	F	W	G	R	T	L	S	A	I	S	S	S	T	D	P	T	S	Y	D	G	F	G	P	F	M	P	G	F	D	I	I	P	Y	N	D	L	P	A	L	E	R	A	L	Q	D	P	N	V	A	A	F	M	V
Template Known Secondary structure												T	T				T	T								T	T					S	S					T	T								T	T	S		S			S	S						T	T									T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		M	T	N	S	Q	N	P	L	G	F	T	L	T	P	Q	K	K	A	Q	L	V	A	L	L	N	Q	Y	N	V	T	L	I	E	D	D	V	Y	S	E	L	Y	F	G	R	E	K	P	L	P	A	K	A	W	D	R	H	D	G	V	L	H	C	S	S	F	S	K	C	L	V	.	P	G	F	R	I	G	W	V	A
Query Conservation																																																																								.
Alig confidence																																																													.	.	.	.								.
Template Conservation																																																													.	.	.	.
Template Sequence		E	P	I	Q	G	E	A	G	V	V	V	P	D	P	G	Y	L	M	G	V	R	E	L	C	T	R	H	Q	V	L	F	I	A	D	E	I	Q	T	G	L	A	R	T	G	R	W	L	A	V	D	Y	E	N	V	R	P	D	I	V	.	.	.	.	L	L	G	K	A	L	S	G	G	L	Y	P	V	S	A	V	L
Template Known Secondary structure			S	S	B	T	T	T	T		B				T	T													T								T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	G	G	T				S			.	.	.	.				G	G	G	G	T	T	S	S
Template Predicted Secondary structure																																																													.	.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.					.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		A	G	K	H	A	R	K	I	Q	R	L	Q	L	M	S	T	L	S	T	S	S	P	M	Q	L	A	L	V	D	Y	L	S	T	R	R	Y	D	A	H	L	R	R	L	R	R	Q	L	A	E	R	K	Q	R	A	W	Q	A	L	L	R	Y	L	P	A	E	V	K	I	H	H	N	D	S	G	Y	F	L	W	.	L
Query Conservation																																																																																.
Alig confidence																																	.	.	.																																													.
Template Conservation																																	.	.	.
Template Sequence		C	D	D	D	I	M	L	T	I	K	P	G	E	H	G	S	T	Y	G	G	N	P	L	G	C	R	V	A	I	A	A	.	.	.	L	E	V	L	E	E	E	N	L	A	E	N	A	D	K	L	G	I	I	L	R	N	E	L	M	K	L	P	S	D	V	V	T	A	V	R	G	K	G	L	L	N	A	I	V	I
Template Known Secondary structure								T	T	S		T	T	S	S			S	S	T	T												.	.	.							T	T																	T	T	S		T	T	T								T	T
Template Predicted Secondary structure																																	.	.	.
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.				.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.		.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		E	L	P	E	P	L	D	A	G	E	L	S	L	A	A	L	T	H	H	I	S	I	A	P	G	K	M	F	S	T	G	E	N	W	S	R	F	F	R	F	N	T	A	.	W	Q	W	G	E	R	E	E	Q	A	V	K	Q	L	G	K	L	I	Q	E
Query Conservation																																													.
Alig confidence																												.	.	.	.	.	.	.	.										.
Template Conservation																												.	.	.	.	.	.	.	.
Template Sequence		K	E	T	K	D	W	D	A	W	K	V	C	L	R	L	R	D	N	G	L	L	A	K	P	T	H	.	.	.	.	.	.	.	.	G	D	I	I	R	F	A	P	P	L	V	I	K	E	D	E	L	R	E	S	I	E	I	I	N	K	T	I	L	S
Template Known Secondary structure				B	T	T	B												T	T					B	S	S	.	.	.	.	.	.	.	.	S	S								T	T																			T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.
Template SS confidence
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.									.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions