Job Description P77730 Confidence 99.86% Date Thu Jan 5 12:32:10 GMT 2012 Rank 181 Aligned Residues 281 % Identity 14% Template c1ibjC_ PDB info PDB header:lyase Chain: C: PDB Molecule:cystathionine beta-lyase; PDBTitle: crystal structure of cystathionine beta-lyase from arabidopsis2 thaliana Resolution 2.30 Å

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		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.					.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.
Query SS confidence																																																									.	.	.	.
Query Sequence		E	L	R	Q	A	I	A	R	R	Y	A	L	Q	G	I	T	I	S	P	D	E	I	V	I	T	A	G	A	L	E	A	L	N	L	S	L	Q	A	V	T	E	P	G	D	W	V	I	V	E	N	P	C	F	Y	G	.	.	.	.	A	L	Q	A	L	E	R	L	R	L	K	A	L	S	V	A	T	D	V	K	E
Query Conservation																																																									.	.	.	.
Alig confidence													.	.	.	.	.	.	.																			.																			.	.	.	.																			.	.	.
Template Conservation													.	.	.	.	.	.	.																			.																																									.	.	.
Template Sequence		A	L	E	S	L	L	A	K	L	D	K	.	.	.	.	.	.	.	A	D	R	A	F	C	F	T	S	G	M	A	A	L	S	A	V	T	.	H	L	I	K	N	G	E	E	I	V	A	G	D	D	V	Y	G	G	S	D	R	L	L	S	Q	V	V	P	R	S	G	V	V	V	K	R	V	N	T	T	.	.	.
Template Known Secondary structure												T	.	.	.	.	.	.	.		S						S	S										.	T	T	S		T	T							T	T												T	G	G	G	G	T								T	T	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.																			.																																									.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.								.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	D	L	Q	A	L	E	L	A	L	Q	E	Y	P	V	K	A	C	W	L	M	T	N	S	Q	N	P	L	G	F	T	L	T	P	Q	K	K	A	Q	L	V	A	L	L	N	Q	Y	N	V	T	L	I	E	D	D	V	Y	S	E	L	Y	F	G	R	E	K	P	L	P	A	K	A	W	D	R	H	D	G	V
Query Conservation
Alig confidence		.	.																							.	.									.	.	.																							.	.	.	.	.	.	.	.
Template Conservation		.	.																							.	.									.	.	.																							.	.	.	.	.	.	.	.
Template Sequence		.	.	K	L	D	E	V	A	A	A	I	G	P	Q	T	K	L	V	W	L	E	S	P	T	.	.	N	P	R	Q	Q	I	S	D	.	.	.	I	R	K	I	S	E	M	A	H	A	Q	G	A	L	V	L	V	D	N	S	I	M	.	.	.	.	.	.	.	.	S	P	V	L	S	R	P	L	E	L	G	A	D
Template Known Secondary structure		.	.											T	T								S	S		.	.	T	T	T						.	.	.										T	T	T								T	T	T	.	.	.	.	.	.	.	.		T	T	T			G	G	G	G	T		S
Template Predicted Secondary structure		.	.																							.	.									.	.	.																							.	.	.	.	.	.	.	.
Template SS confidence
				206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.			.	.	230	.	.	.	.	.				.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.									.	.	260	.	.	.	.	.	.	.	.	.	270
		305	.	.	.	.	310	.	.	.	.	.			.	.	.	.	320	.	.	.	.	.	.			.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure													.	.												.	.
Query SS confidence													.	.												.	.
Query Sequence		L	H	C	S	S	F	S	K	C	L	V	.	.	P	G	F	R	I	G	W	V	A	A	G	.	.	K	H	A	R	K	I	Q	R	L	Q	L	M	S	T	L	S	T	S	S	P	M	Q	L	A	L	V	D	Y	L	S	T	R	R	Y	D	A	H	L	R	R	L	R	R	Q	L	A	E	R	K	Q	R	A	W	Q
Query Conservation													.	.												.	.
Alig confidence													.	.												.	.																																.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.
Template Sequence		I	V	M	H	S	A	T	K	F	I	A	G	H	S	D	V	M	A	G	V	L	A	V	K	G	E	K	L	A	K	E	V	Y	F	L	Q	N	S	E	G	S	G	L	A	P	F	D	C	W	L	C	L	R	G	I	K	T	.	.	.	.	.	.	M	A	L	R	I	E	K	Q	Q	E	N	A	R	K	I	A	M
Template Known Secondary structure							T	T	T	T	T	T		S	S										S	S														T	T		B														T	T	.	.	.	.	.	.
Template Predicted Secondary structure																																																											.	.	.	.	.	.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.							.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.																		.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Query Sequence		A	L	L	R	Y	L	P	A	E	V	K	I	H	H	N	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	F	L	W	L	E	L	P	E	P	L	D	A	G	E	L	S	L	A	A	L	T	H	H	I	S	I	A	P	G	K	M	F	S	T	G	E	N	.	.	.	.	.	.	.
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Alig confidence							.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Template Conservation							.	.
Template Sequence		Y	L	S	S	H	.	.	P	R	V	K	K	V	Y	Y	A	G	L	P	D	H	P	G	H	H	L	H	F	S	Q	A	K	G	A	G	S	V	F	S	F	I	T	G	S	V	A	L	S	K	H	L	V	E	T	T	K	Y	F	S	I	A	V	S	F	G	S	V	K	S	L	I	S	M	P	C	F	M	S	H	A
Template Known Secondary structure					T		.	.	T	T							T	T	S	T	T		T	T					T	T	S		S				S							S													S	S	S				S				S	S	S						T	T	T	T	T	T	T
Template Predicted Secondary structure							.	.
Template SS confidence
		345	.	.	.	.			350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
														437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	W	S	R	F	F	R	F	N	T	A	W	Q	W	G	E	R	E	E	Q	A	V	K	Q	L	G	K	L	I	Q	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation																															.	.	.
Template Sequence		S	I	P	A	E	V	R	E	A	R	G	L	T	E	D	L	V	R	I	S	A	G	I	E	D	V	D	D	L	.	.	.	I	S	D	L	D	I	A	F	K	T
Template Known Secondary structure		T			S	S	T	T	T	T	S	S			T	T								S	S						.	.	.									T	T
Template Predicted Secondary structure																															.	.	.
Template SS confidence
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.				.	.	.	.	.	.	.	.	460	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions