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Job DescriptionQ46845
Confidence100.00%DateThu Jan 5 12:35:12 GMT 2012
Rank58Aligned Residues182
% Identity21%Templatec3lypA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:stringent starvation protein a; PDBTitle: structure of stringent starvation protein a homolog from pseudomonas2 fluorescens
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   45....50. ........60.........70.........80.........90.........100.........110.........120...
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Query Sequence  LQLYSLG. TPNGQKVTIMLEELLALGVTGAEYDAWLIRIGDGDQFSSGFVEVNPNSKIPALRDHTHNPPIRVFESGSILL
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Template Sequence  LACYSDPADHYSHRVRIVLAEK. . . . . . GVSAEIISVE. . . . . . QPPKLIEVNPYGSLPTLVDRL. . . . . ALWESTVVXE
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   910.........20.........30 .........40 .........50.........60. ........70.
 
   124.....130. ........140.........150.........160.........170.........180.........190.........200.
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Query Sequence  YLAEKFGY. . FLPQDLAKRTETMNWLFWLQGAAPFLGGGFGHFYHYAPVKIEYAINRFTMEAKRLLDVLDKQLAQHKFVA
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Template Sequence  YLDERYPHPPLLPVYPVARANSRLLIHRIQRDWCGQVDLI. . . . . LDPRTKEAARVQARKELRESLTGVSPLFADKPFFL
Template Known Secondary structure  S
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   76...80.........90.........100.........110..... ....120.........130.........140.........150
 
   202.......210.........220.........230... ......240.........250.....
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Query Sequence  GDEYTIADMAIWPWFGNVVLGGVYDAAEFLDA. GSYKHVQRWAKEVGERPAVKRG
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Template Sequence  SEEQSLVDCCLLPILWRLPVLG. . . . . . . IELPRQAKPLLDYXERQFAREAFQAS
Template Known Secondary structure  BSS

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   151........160.........170.. .......180.........190........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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