Job Description Q46845 Confidence 100.00% Date Thu Jan 5 12:35:12 GMT 2012 Rank 11 Aligned Residues 185 % Identity 19% Template c3lykA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:stringent starvation protein a homolog; PDBTitle: structure of stringent starvation protein a homolog from2 haemophilus influenzae Resolution 2.10 Å

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		46	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		Q	L	Y	S	L	G	.	T	P	N	G	Q	K	V	T	I	M	L	E	E	L	L	A	L	G	V	T	G	A	E	Y	D	A	W	L	I	R	I	G	D	G	D	Q	F	S	S	G	F	V	E	V	N	P	N	S	K	I	P	A	L	R	D	H	T	H	N	P	P	I	R	V	F	E	S	G	S	I	L	L	Y
Query Conservation								.
Alig confidence								.															.	.	.	.	.	.												.	.	.																								.	.	.	.
Template Conservation																							.	.	.	.	.	.												.	.	.																								.	.	.	.
Template Sequence		T	L	F	S	N	K	D	D	I	Y	C	H	Q	V	K	I	V	L	A	E	K	.	.	.	.	.	.	G	V	L	Y	E	N	A	E	V	D	L	.	.	.	Q	A	L	P	E	D	L	X	E	L	N	P	Y	G	T	V	P	T	L	V	D	R	D	.	.	.	.	L	V	L	F	N	S	R	I	I	X	E	Y
Template Known Secondary structure							T	T															.	.	.	.	.	.	T										T	.	.	.	T	S										T	T			S						T	T	.	.	.	.					S
Template Predicted Secondary structure																							.	.	.	.	.	.												.	.	.																								.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.							.	.	.	.	.	.	.	40	.	.	.				.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.					.	.	.	70	.	.	.	.	.	.	.	.
		125	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		L	A	E	K	F	G	Y	.	.	F	L	P	Q	D	L	A	K	R	T	E	T	M	N	W	L	F	W	L	Q	G	A	A	P	F	L	G	G	G	F	G	H	F	Y	H	Y	A	P	V	K	I	E	Y	A	I	N	R	F	T	M	E	A	K	R	L	L	D	V	L	D	K	Q	L	A	Q	H	K	F	V	A	G
Query Conservation									.	.
Alig confidence									.	.																																	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.
Template Sequence		L	D	E	R	F	P	H	P	P	L	X	Q	V	Y	P	V	S	R	A	K	D	R	L	L	X	L	R	I	E	Q	D	W	Y	P	T	L	A	K	A	E	N	.	.	.	.	.	.	.	G	T	E	K	E	K	T	S	A	L	K	Q	L	K	E	E	L	L	G	I	A	P	I	F	Q	Q	X	P	Y	F	X	N
Template Known Secondary structure						S		S	S			S		S	S																		T										.	.	.	.	.	.	.	S																			T							S	S	B	T	T	B
Template Predicted Secondary structure																																											.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.								120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	Y	T	I	A	D	M	A	I	W	P	W	F	G	N	V	V	L	G	G	V	Y	D	A	A	E	F	L	D	A	G	S	Y	K	H	V	Q	R	W	A	K	E	V	G	E	R	P	A	V	K	R	G
Query Conservation
Alig confidence																									.	.	.	.	.
Template Conservation																									.	.	.	.	.
Template Sequence		E	E	F	G	L	V	D	C	Y	V	A	P	L	L	W	K	L	K	H	L	G	V	E	.	.	.	.	.	F	T	G	T	G	S	K	A	I	K	A	Y	X	E	R	V	F	T	R	D	S	F	L	Q	S
Template Known Secondary structure		S	S																	T	T	T			.	.	.	.	.			S	T	T													T	S
Template Predicted Secondary structure																									.	.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.						.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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