Job Description Q46845 Confidence 99.97% Date Thu Jan 5 12:35:12 GMT 2012 Rank 84 Aligned Residues 190 % Identity 18% Template c3fy7B_ PDB info PDB header:transport protein Chain: B: PDB Molecule:chloride intracellular channel protein 3; PDBTitle: crystal structure of homo sapiens clic3 Resolution 1.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		44	.	.	.	.	.	50	.		.									.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure										.		.	.	.	.	.	.	.	.
Query SS confidence										.		.	.	.	.	.	.	.	.
Query Sequence		P	L	Q	L	Y	S	L	G	.	T	.	.	.	.	.	.	.	.	P	N	G	Q	K	V	T	I	M	L	E	E	L	L	A	L	G	V	T	G	A	E	Y	D	A	W	L	I	R	I	G	D	G	D	Q	F	S	S	G	F	V	E	V	N	P	N	S	K	I	P	A	L	R	D	H	T	H	N	P	P	I	R
Query Conservation										.		.	.	.	.	.	.	.	.
Alig confidence										.		.	.	.	.	.	.	.	.														.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template Conservation																																	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template Sequence		K	L	Q	L	F	V	K	A	S	E	D	G	E	S	V	G	H	C	P	S	C	Q	R	L	F	M	V	L	L	L	K	.	.	.	.	.	.	G	V	P	F	T	L	T	T	V	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Q	L	P	I	L	L	Y	D	S	.	.	.	.	D	A
Template Known Secondary structure									B		T	T	S	S	S	B		S															.	.	.	.	.	.	T											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S						T	T	.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.							.	.	.	.	40	.	.	.	.	.	.																	.	.	.	50	.	.	.	.	.	.					.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.						.	.	.	.
Predicted Secondary structure																			.	.																																																					.	.	.	.	.
Query SS confidence																			.	.																																																					.	.	.	.	.
Query Sequence		V	F	E	S	G	S	I	L	L	Y	L	A	E	K	F	G	Y	.	.	F	L	P	Q	D	L	A	K	R	T	E	T	M	N	W	L	F	W	L	Q	G	A	A	P	F	L	G	G	G	F	G	H	F	Y	H	Y	A	P	V	K	I	E	Y	A	I	N	R	F	T	M	E	A	.	.	.	.	.	K	R	L	L
Query Conservation																			.	.																																																					.	.	.	.	.
Alig confidence																			.	.																																																					.	.	.	.	.
Template Conservation
Template Sequence		K	T	D	T	L	Q	I	E	D	F	L	E	E	T	L	G	P	P	D	F	P	S	L	A	P	R	Y	R	E	S	N	T	A	G	N	D	V	F	H	K	F	S	A	F	I	K	N	P	V	P	A	Q	D	E	A	L	Y	Q	Q	L	L	R	A	L	A	R	L	D	S	Y	L	R	A	P	L	E	H	E	L	A
Template Known Secondary structure																S		T	T	T	S						S		G	G	G	G	T	T	T	T	T										T				G	G	G																					S
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	L	D	K	Q	L	A	Q	H	K	F	V	A	G	D	E	Y	T	I	A	D	M	A	I	W	P	W	F	G	N	V	V	L	G	G	V	Y	D	A	A	E	F	L	D	A	G	S	Y	K	H	V	Q	R	W	A	K	E	V	G	E	R	P	A	V	K	R	G	R	I	V	N	R
Query Conservation
Alig confidence																																							.
Template Conservation																																							.
Template Sequence		G	E	P	Q	L	R	E	S	R	R	R	F	L	D	G	D	R	L	T	L	A	D	C	S	L	L	P	K	L	H	I	V	D	T	V	C	A	.	H	F	R	Q	A	P	I	P	A	E	L	R	G	V	R	R	Y	L	D	S	A	M	Q	E	K	E	F	K	Y	T	C	P	H	S	A
Template Known Secondary structure				T	T			S				S	S	S	S	S	S	S																					.				S					T	T												T	T	S					T	T
Template Predicted Secondary structure																																							.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions