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Job DescriptionQ46845
Confidence100.00%DateThu Jan 5 12:35:12 GMT 2012
Rank36Aligned Residues199
% Identity36%Templatec1k0dB_
PDB info PDB header:gene regulationChain: B: PDB Molecule:ure2 protein; PDBTitle: ure2p in complex with glutathione
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50. ........60.........70.........80.........90.........100.........110.........120..
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Query Sequence  PLQLYSLG. TPNGQKVTIMLEELLALGVTGAEYDAWLIRIGDGDQFSSGFVEVNPNSKIPALRDHTHNPPIRVFESGSIL
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Template Sequence  GYTLFSHRSAPNGFKVAIVLSEL. . . . . . GFHYNTIFLDFNLGEHRAPEFVSVNPNARVPALIDHGMDN. LSIWESGAIL
Template Known Secondary structure  S
TT
T......T



GGGTGGGS
TT

S
GGGTS.S
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   113......120.........130..... ....140.........150.........160.........170..... ....180.....
 
   123......130 .........140.........150.........160.........170.........180.........190...
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Query Sequence  LYLAEKFG. . . . . . YFLPQDLAKRTETMNWLFWLQGAAPFLGGGFGHFYHYAPVKIEYAINRFTMEAKRLLDVLDKQ. . .
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Template Sequence  LHLVNKYYKETGNPLLWSDDLADQSQINAWLFFQTSGHAPMIGQALHFRYFHSQKIASAVERYTDEVRRVYGVVEMALAE
Template Known Secondary structure  S

TTS
S
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   186...190.........200.........210.........220.........230.........240.........250.........260.....
 
   194.....200.........210.........220.........230.........240.........250.....
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Query Sequence  . . . . . . LAQHKFVAGDEYTIADMAIWPWFGNVVLGGVYDAAEFLDAGSYKHVQRWAKEVGERPAVKRG
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Template Sequence  RREALVMDYPVWLVGDKLTIADLAFVPWNNVVDRIGI. . . . . . NIKIEFPEVYKWTKHMMRRPAVIKA
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SBTTB

TTTTGGGGT
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   266...270.........280.........290.........300.. .......310.........320.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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