Job Description Q46845 Confidence 100.00% Date Thu Jan 5 12:35:12 GMT 2012 Rank 59 Aligned Residues 197 % Identity 20% Template c1iyiA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:hematopoietic prostagladin d synthase; PDBTitle: crystal structure of hematopoietic prostaglandin d synthase Resolution 1.80 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		P	V	G	K	H	P	L	Q	L	Y	S	L	G	.	T	P	N	G	Q	K	V	T	I	M	L	E	E	L	L	A	L	G	V	T	G	A	E	Y	D	A	W	L	I	R	I	G	D	G	D	Q	F	S	S	G	F	V	E	V	N	P	N	S	K	I	P	A	L	R	D	H	T	H	N	P	P	I	R	V	F	E
Query Conservation															.
Alig confidence				.	.	.	.								.															.	.	.	.	.	.															.	.	.	.																				.	.	.	.
Template Conservation				.	.	.	.																							.	.	.	.	.	.															.	.	.	.																				.	.	.	.
Template Sequence		P	N	.	.	.	.	Y	K	L	T	Y	F	N	M	R	G	R	A	E	I	I	R	Y	I	F	A	Y	L	.	.	.	.	.	.	D	I	Q	Y	E	D	H	R	I	E	Q	A	D	W	.	.	.	.	P	E	I	K	S	T	L	P	F	G	K	I	P	I	L	E	V	D	G	.	.	.	.	L	T	L	H	Q
Template Known Secondary structure				.	.	.	.							S	S	S	G	G	G										T	.	.	.	.	.	.	T										G	G	G		.	.	.	.					T	T	S	T	T	S		S						T	T	.	.	.	.
Template Predicted Secondary structure				.	.	.	.																							.	.	.	.	.	.															.	.	.	.																				.	.	.	.
Template SS confidence
		2	.					.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.							.	.	.	.	30	.	.	.	.	.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.					.	60	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	S	I	L	L	Y	L	A	E	K	F	G	Y	F	L	P	Q	D	L	A	K	R	T	E	T	M	N	W	L	F	W	L	Q	G	A	A	P	F	L	G	G	G	F	G	H	F	Y	H	Y	A	P	V	K	I	E	Y	A	I	N	R	F	T	M	E	A	K	R	L	L	D	V	L	D	K	Q	L	A	Q	H
Query Conservation
Alig confidence															.																											.	.	.	.
Template Conservation															.																											.	.	.	.
Template Sequence		S	L	A	I	A	R	Y	L	T	K	N	T	D	.	L	A	G	N	T	E	M	E	Q	C	H	V	D	A	I	V	D	T	L	D	D	F	M	S	C	F	.	.	.	.	P	W	A	E	K	K	Q	D	V	K	E	Q	M	F	N	E	L	L	T	Y	N	A	P	H	L	M	Q	D	L	D	T	Y	L	G	G	R
Template Known Secondary structure											T	T	S	T	.	T	S		S	S																			T	T	S	.	.	.	.		T	T		S																T													T	T
Template Predicted Secondary structure															.																											.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.					.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	V	A	G	D	E	Y	T	I	A	D	M	A	I	W	P	W	F	G	N	V	V	L	G	G	V	Y	D	A	A	E	F	L	D	A	G	S	Y	K	H	V	Q	R	W	A	K	E	V	G	E	R	P	A	V	K	R	G	R	I	V	N	R	T	N	G	P	L
Query Conservation
Alig confidence																													.	.	.	.	.	.																										.
Template Conservation																													.	.	.	.	.	.																										.
Template Sequence		E	W	L	I	G	M	S	V	T	W	A	D	F	Y	W	E	I	C	S	T	T	L	L	V	F	K	P	.	.	.	.	.	.	D	L	L	D	N	H	P	R	L	V	T	L	R	K	K	V	Q	A	I	P	A	V	A	N	W	.	I	K	R	R	P	Q	T	K	L
Template Known Secondary structure		S	S	S	S	T	T	S																				T	.	.	.	.	.	.	T	T	T	T	T														S							.				S
Template Predicted Secondary structure																													.	.	.	.	.	.																										.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.							.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions