 |
Job Description | P0A809 | Confidence | 41.13% | Date | Thu Jan 5 11:06:34 GMT 2012 |
Rank | 157 | Aligned Residues | 42 |
% Identity | 24% | Template | d1jx4a2 |
SCOP info | DNA/RNA polymerases
| DNA/RNA polymerases
| Lesion bypass DNA polymerase (Y-family), catalytic domain
|
Resolution | 1.70 |
|
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | V | G | P | K | L | A | L | A | I | L | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | M | S | A | Q | Q | F | V | N | A | V | E | R | E | E | V | G | A | L | V | K | L | P | G | I | G | K | K | T | A | E | R | L |
Query Conservation |   |
|
|
|
|
|   |
|
|   |
|
|
| . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|
|   |   |
|
|   |   |   |
|   |   |   |
|   |   |
|
|
|
|
|
|
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|   |   |
|
|
|
|
|
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
| . | . | . |
|   |   |
|   |
|
|
|   |   |   |   |   |   |
|
Template Sequence |   |
G | I | S | K | N | K | V | F | A | K | I | A | A | D | X | A | K | P | N | G | I | K | V | I | D | D | E | E | V | K | R | L | I | R | E | L | D | . |
. |
. |
I | A | D | V | P | G | I | G | N | I | T | A | E | K | L |
Template Known Secondary structure |   |
 |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  | S | B | . | . | . | G | G | G | S | T | T |
|
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | |
|
|
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|