Return to main results Retrieve Phyre Job Id

Job DescriptionP0A809
Confidence98.19%DateThu Jan 5 11:06:34 GMT 2012
Rank16Aligned Residues72
% Identity19%Templated1dgsa1
SCOP infoSAM domain-like RuvA domain 2-like NAD+-dependent DNA ligase, domain 3
Resolution2.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   72.......80.........90.........100.........110.........120.........130.........140.........150.
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  FKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSP
Query Conservation 
  

 
 




 

 


     

  

   
   
  








 






 
                    
Alig confidence 























...



































.................
Template Conservation   
 



 


   
  
   
 
...
  
  
  
 
  
 


   
  
        
 .................
Template Sequence  LLYALGLPGVGEVLARNLARRFGT. . . MDRLLEASLEELIEVEEVGELTARAILETLKDPAFR. . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT
SS

TTSB...TT

TSTT


.................
Template Predicted Secondary structure 









...









.................
Template SS confidence 















































































   506...510.........520......... 530.........540.........550.........560.....
 
   152.......160.........170...
Predicted Secondary structure 










Query SS confidence 





















Query Sequence  ASPATDDAEQEAVAALVALGYK
Query Conservation            
   

  


 
Alig confidence  ..........











Template Conservation  ..........  
  
   

 
Template Sequence  . . . . . . . . . . DLVRRLKEAGVS
Template Known Secondary structure  ..........TT

Template Predicted Secondary structure  ..........



Template SS confidence 





















   566...570.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions