Job Description P0A809 Confidence 88.43% Date Thu Jan 5 11:06:34 GMT 2012 Rank 88 Aligned Residues 47 % Identity 19% Template c3psiA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: crystal structure of the spt6 core domain from saccharomyces2 cerevisiae, form spt6(239-1451) Resolution 3.30 Å

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		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																																			.	.
Query SS confidence																																			.	.
Query Sequence		L	F	K	E	L	I	K	T	N	G	V	G	P	K	L	A	L	A	I	L	S	G	M	S	A	Q	Q	F	V	N	A	V	E	.	.	R	E	E	V	G	A	L	V	K	L	P	G	I	G	K	K	T	A	E	R
Query Conservation																																			.	.
Alig confidence																								.	.	.	.	.	.						.	.
Template Conservation																								.	.	.	.	.	.
Template Sequence		Y	A	S	A	L	K	Y	I	S	G	F	G	K	R	K	A	I	D	F	L	Q	S	.	.	.	.	.	.	L	Q	R	L	N	E	P	L	L	A	R	Q	Q	L	I	T	H	N	I	L	H	K	T	I	F	M	N
Template Known Secondary structure				T	T	G	G	G	S	T	T													.	.	.	.	.	.						S					T	T					T	T		S
Template Predicted Secondary structure																								.	.	.	.	.	.
Template SS confidence
		944	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.							.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions