|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | T | L | R | I | G | L | V | S | I | S | D | R | A | S | S | G | V | Y | Q | D | K | G | I | P | A | L | E | E | W | L | T | S | A | L | T | T | P | F | E | L | E | T | R | L | I | P | D | E | Q | A | I | I | E | Q | T | L | C | E | L | V | D | E | M | S | C | H | L | V | L | T | T | G | G | T | G | P | A | R | R |
Query Conservation |   |
  |   |
|
|   |   |
|
|
|
|
|
|   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|
|   |   |
|
|
|   |   |   |
|   |   |   |
|   |
|
|   |   |
|   |   |   |
|   |   |   |
|   |   | . | . |
|   |   |   |   |   |
|   |
|
|   |   |   |
|   |   |
|
|   |   |   |
|   |   |   | . |   |
|
|
|
|
|
|
|
|   |
|   |
|   |   |
Template Sequence |   |
X | H | I | K | S | A | I | I | V | V | S | D | R | I | S | T | G | T | R | E | N | K | A | L | P | L | L | Q | R | L | X | S | D | Y | S | Y | E | . |
. |
L | I | S | E | V | V | V | P | E | G | Y | D | T | V | V | E | A | I | A | T | A | L | K | Q | G | . |
A | R | F | I | I | T | A | G | G | T | G | I | R | A | K |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |  | T | S | S |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  | . | . |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | . |
| S |  |  |  |  |  | S |
|
| S | S | S | T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  | . | . |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | |
|
. | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
. | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | V | T | P | D | A | T | L | A | V | A | D | R | E | M | P | G | F | G | E | Q | M | R | Q | I | S | L | H | F | V | P | T | A | I | L | S | R | Q | V | G | V | I | R | K | Q | A | L | I | L | N | L | P | G | Q | P | K | S | I | K | E | T | L | E | G | V | K | D | A | E | G | N |
Query Conservation |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |   |
|   |   |   |   |   |   |
|   |   |
|
|
|   |
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |
|   |
|   |   |   |   |   |   |   |
|   |
|   |
|   |   |
Template Sequence |   |
N | Q | T | P | E | A | T | A | S | F | I | H | T | R | C | E | G | L | E | Q | Q | I | L | I | H | G | G | L | S | R | G | I | V | . |
. |
. |
G | V | T | G | R | D | D | H | A | A | L | I | V | N | A | P | S | S | S | G | G | I | T | D | T | W | A | V | I | S | P | V | I | P | N |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  | T | T |
| S |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  | . | . | . |  |  | S |
| S | S | T | T |
|
|  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  | G | G | G |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
| . | . | . |
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | |
|
|
. | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . |
  |