Job Description P0AF03 Confidence 34.55% Date Thu Jan 5 11:24:45 GMT 2012 Rank 136 Aligned Residues 83 % Identity 8% Template d1tjya_ SCOP info Periplasmic binding protein-like I Periplasmic binding protein-like I L-arabinose binding protein-like Resolution 1.30

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	L	R	I	G	L	V	S	I	S	D	R	A	S	S	G	V	Y	Q	D	K	G	I	P	A	L	E	E	W	L	T	S	A	L	T	T	P	F	E	L	E	T	R	L	I	P	D	E	Q	A	I	I	E	Q	T	L	C	E	L	V	D	E	M	S	C	H	L	V	L	T	T	G	G	T	G	P	A	R	R
Query Conservation
Alig confidence													.	.	.																								.	.																									.
Template Conservation													.	.	.																								.	.																									.
Template Sequence		S	A	E	R	I	A	F	I	P	K	L	.	.	.	V	G	V	G	F	F	T	S	G	G	N	G	A	Q	E	A	G	K	A	L	G	I	D	.	.	V	T	Y	D	G	P	T	E	P	S	V	S	G	Q	V	Q	L	V	N	N	F	V	N	Q	.	G	Y	D	A	I	I	V	S	A	V	S	P	D	G	L	C
Template Known Secondary structure											S	S	.	.	.	S	S	S																		T			.	.							S	S																T	.	T		S							S	S	S	S	T	T
Template Predicted Secondary structure													.	.	.																								.	.																									.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.				.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	T	P	D	A	T	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	A	L	K	R	A	M	Q	R
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions