 |
Job Description | P0AF03 | Confidence | 22.23% | Date | Thu Jan 5 11:24:45 GMT 2012 |
Rank | 202 | Aligned Residues | 66 |
% Identity | 14% | Template | d1nj1a1 |
SCOP info | Anticodon-binding domain-like
| Class II aaRS ABD-related
| Anticodon-binding domain of Class II aaRS
|
Resolution | 2.55 |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | N | T | L | R | I | G | L | V | S | I | S | D | R | A | S | S | G | V | Y | Q | D | K | G | I | P | A | L | E | E | W | L | T | S | A | L | T | T | P | F | E | L | E | T | R | L | I | P | D | E | Q | A | I | I | E | Q | T | L | C | E | L | V | D | E | M | S | C | H | L | V | L | T | T | G |
Query Conservation |   |
  |   |   |
|
|   |   |
|
|
|
|
|
|   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|   |
|
|
|
|   |   |   | . |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|
|   | . | . | . | . | . | . |
|   |
|
|   |   |   |   |
|
|
|
|
|   |   |   |
| . |   |   |   |
|
|
|   |   |
|
|
|
|
Template Sequence |   |
V | A | A | H | Q | V | V | I | V | P | I | I | F | K | . |
K | A | A | E | E | V | M | E | A | C | R | E | L | R | S | R | L | E | A | A | G | F | R | . |
. |
. |
. |
. |
. |
V | H | L | D | D | R | D | I | R | A | G | R | K | Y | Y | E | W | . |
E | M | R | G | V | P | L | R | V | E | I | G |
Template Known Secondary structure |   |
T | S | S |
| S |  |  |  |  |  |
|
| S | S | . | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
| . | . | . | . | . | . |  |  |  |
|
|
| S | S |
|  |  |  |  |  |  |  |  | . |  |  |  |  |
| S |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . | . | . | . | . | . |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  | . |  |  |
|
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
292 | . | . | . | . | . | . | . | 300 | . | . | . | . | . | |
. | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
. | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | |
. | . | . | . | 350 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|