 |
Job Description | P0AF03 | Confidence | 27.43% | Date | Thu Jan 5 11:24:45 GMT 2012 |
Rank | 169 | Aligned Residues | 76 |
% Identity | 9% | Template | c3p94A_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:gdsl-like lipase; |
PDBTitle: crystal structure of a gdsl-like lipase (bdi_0976) from2 parabacteroides distasonis atcc 8503 at 1.93 a resolution
|
Resolution | 1.93 Å |
|
 |
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | |
|
|
. | . | . | 80 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
| . | . | . |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
L | V | S | I | S | D | R | A | S | S | G | V | Y | Q | D | K | G | I | P | A | L | E | E | W | L | T | S | A | L | T | T | P | F | E | L | E | T | R | L | I | P | D | E | Q | A | I | I | E | Q | T | L | C | E | L | V | D | E | M | S | C | H | L | V | L | T | T | G | G | T | . |
. |
. |
G | P | A | R | R | D | V | T |
Query Conservation |   |
|
|
|
|
|
|   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   | . | . | . |
|   |
|   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|
|
|
|
|   |
| . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . |
|   |
|   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | V | F | X | G | N | S | I | T | D | G | . |
. |
. |
. |
. |
W | W | P | A | D | S | T | F | F | I | R | N | N | . |
. |
. |
. |
F | V | D | R | G | I | S | G | Q | T | T | S | E | X | L | V | R | F | R | Q | D | V | I | N | L | K | P | K | A | V | V | I | L | A | G | I | N | D | I | A | H | N | N | G | V | I | A |
Template Known Secondary structure |   |
 |  |  |  |  | S |  |  |  |  | T | . | . | . | . | . |  |  |  |  |
| T | T |  |  |  |  |  | T | . | . | . | . |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  | T | G | G | G |
|  |  |  |  |  |  |  |
|
|  |  |  |  | T | T | T | T | S |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |
| . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
48 | . | 50 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 60 | . | . | . | . | . | . | . | . | . | 70 | . | |
|
|
|
. | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . |
  |
  |   |
85 | . | . | . | . | 90 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
P | D | A | T | L | A | V | A |
Query Conservation |   |
  |
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|
Template Sequence |   |
L | E | N | V | F | G | N | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
119 | 120 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|