Job Description P0AF03 Confidence 47.50% Date Thu Jan 5 11:24:45 GMT 2012 Rank 103 Aligned Residues 64 % Identity 14% Template c3lm8D_ PDB info PDB header:transferase Chain: D: PDB Molecule:thiamine pyrophosphokinase; PDBTitle: crystal structure of thiamine pyrophosphokinase from2 bacillus subtilis, northeast structural genomics consortium3 target sr677 Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	G	I	P	A	L	E	E	W	L	T	S	A	L	T	T	P	F	E	L	E	T	R	L	I	P	D	E	Q	A	I	I	E	Q	T	L	C	E	L	V	D	E	M	S	C	H	L	V	L	T	T	G	G	T	G	P	A	R	R	D	V	T	P	D	A	T	L	A	V	A
Query Conservation
Alig confidence																								.	.	.	.	.																	.													.
Template Conservation																								.	.	.	.	.																	.													.
Template Sequence		D	S	I	T	E	Q	E	R	R	R	I	E	K	A	A	P	A	L	H	V	Y	Q	.	.	.	.	.	A	D	Q	T	D	L	D	L	A	L	D	W	A	L	E	K	.	Q	P	D	I	I	Q	I	F	G	I	T	G	.	G	R	A	D	H	F	L	G	N	I	Q	L	L	Y
Template Known Secondary structure		T	T														T	T						.	.	.	.	.																T	.			S						S				.	S
Template Predicted Secondary structure																								.	.	.	.	.																	.													.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.						.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions