Job Description P0AF03 Confidence 99.97% Date Thu Jan 5 11:24:45 GMT 2012 Rank 12 Aligned Residues 143 % Identity 15% Template c3kbqA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein ta0487; PDBTitle: the crystal structure of the protein cina with unknown function from2 thermoplasma acidophilum Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	G	L	V	S	I	S	D	R	A	S	S	G	V	Y	Q	D	K	G	I	P	A	L	E	E	W	L	T	S	A	L	T	T	P	F	E	L	E	T	R	L	I	P	D	E	Q	A	I	I	E	Q	T	L	C	E	L	V	D	E	M	S	C	H	L	V	L	T	T	G	G	T	G	P	A	R	R	D	V	T
Query Conservation
Alig confidence																																				.	.																									.	.
Template Conservation																																				.	.																									.	.
Template Sequence		N	A	S	V	I	T	V	G	N	E	I	L	K	G	R	T	V	N	T	N	A	A	F	I	G	N	F	L	T	Y	H	G	Y	Q	.	.	V	R	R	G	F	V	V	M	D	D	L	D	E	I	G	W	A	F	R	V	A	L	E	V	.	.	S	D	L	V	V	S	S	G	G	L	G	P	T	F	D	D	M	T
Template Known Secondary structure														T	T	S	S															T	T			.	.									S																.	.		S						S			S	S	S	T	T
Template Predicted Secondary structure																																				.	.																									.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.																				.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	D	A	T	L	A	V	A	D	R	E	M	P	G	F	G	E	Q	M	R	Q	I	S	L	H	F	V	P	T	A	I	L	S	R	Q	V	G	V	I	R	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	L	I	L	N	L	P	G	Q	P	K	S	I	K	E	T	L	E	G
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	E	G	F	A	K	C	I	G	Q	D	L	R	I	D	E	D	A	L	A	M	I	K	K	K	Y	G	L	T	P	Q	R	L	K	M	A	K	I	P	P	S	C	R	P	I	E	N	P	V	G	T	A	P	G	L	I	C	A	V	G	G	K	K	V	I	I	L	P	G	V	P	K	E	M	E	A	L	L	K	A
Template Known Secondary structure										T																									G	G	G				T	T							S	S	S	S	S								T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		146	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	D	A	E	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	E	K	D	I	I
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions