Job Description P0AF03 Confidence 28.03% Date Thu Jan 5 11:24:45 GMT 2012 Rank 163 Aligned Residues 73 % Identity 16% Template c3ikmC_ PDB info PDB header:transferase Chain: C: PDB Molecule:dna polymerase subunit gamma-2; PDBTitle: crystal structure of human mitochondrial dna polymerase2 holoenzyme Resolution 3.24 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.					.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.
Query SS confidence																																																							.	.	.	.
Query Sequence		M	N	T	L	R	I	G	L	V	S	I	S	D	R	A	S	S	G	V	Y	Q	D	K	G	I	P	A	L	E	E	W	L	T	S	A	L	T	T	P	F	E	L	E	T	R	L	I	P	D	E	Q	A	I	.	.	.	.	I	E	Q	T	L	C	E	L	V	D	E	M	S	C	H	L	V	L	T	T	G	G	T
Query Conservation																																																							.	.	.	.
Alig confidence														.	.	.																							.	.	.	.	.	.	.										.	.	.	.									.
Template Conservation														.	.	.																							.	.	.	.	.	.	.																						.
Template Sequence		L	A	P	I	K	V	A	L	D	V	G	R	.	.	.	G	P	T	L	E	L	R	Q	V	C	Q	G	L	F	N	E	L	L	E	N	G	I	.	.	.	.	.	.	.	S	V	W	P	G	Y	L	E	T	M	Q	S	S	L	E	Q	L	Y	S	K	Y	.	D	E	M	S	I	L	F	T	V	L	V	T	E	T
Template Known Secondary structure		T	S	S									S	.	.	.	S	S						T	T												T		.	.	.	.	.	.	.		B							T	S	S	S										.		T	T	T									T	T
Template Predicted Secondary structure														.	.	.																							.	.	.	.	.	.	.																						.
Template SS confidence
		378	.	380	.	.	.	.	.	.	.	.	.				390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.								.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.		.	.	.	.	.	.	.	440	.	.	.	.	.	.
		77	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	A	R	R	D	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	E	N	G	L	I	H
Template Known Secondary structure		T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		447	.	.	450	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions