Job Description P0AF03 Confidence 25.66% Date Thu Jan 5 11:24:45 GMT 2012 Rank 179 Aligned Residues 67 % Identity 6% Template c3dc7B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative uncharacterized protein lp_3323; PDBTitle: crystal structure of the protein q88sr8 from lactobacillus plantarum.2 northeast structural genomics consortium target lpr109. Resolution 2.12 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.
Query SS confidence																																																			.	.
Query Sequence		L	V	S	I	S	D	R	A	S	S	G	V	Y	Q	D	K	G	I	P	A	L	E	E	W	L	T	S	A	L	T	T	P	F	E	L	E	T	R	L	I	P	D	E	Q	A	I	I	E	Q	.	.	T	L	C	E	L	V	D	E	M	S	C	H	L	V	L	T	T	G	G	T
Query Conservation																																																			.	.
Alig confidence																				.	.																														.	.
Template Conservation																				.	.
Template Sequence		P	A	W	L	G	D	S	I	T	A	N	N	G	L	A	T	V	H	.	.	Y	H	D	I	L	A	A	D	W	D	V	E	R	S	D	N	L	G	I	S	G	S	T	I	G	S	R	Y	D	A	X	A	V	R	Y	Q	A	I	P	E	D	A	D	F	I	A	V	F	G	G	V
Template Known Secondary structure							S	T	T	T	S	T	T	S	S		S	S		.	.										T		S								T	T			S	S	T	T	S	S						G	G	G	S		T	T		S
Template Predicted Secondary structure																				.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions