Job Description P0AF03 Confidence 57.76% Date Thu Jan 5 11:24:45 GMT 2012 Rank 83 Aligned Residues 80 % Identity 10% Template c2vk2A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:abc transporter periplasmic-binding protein ytfq; PDBTitle: crystal structure of a galactofuranose binding protein Resolution 1.20 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	R	I	G	L	V	S	I	S	D	R	A	S	S	G	V	Y	Q	D	K	G	I	P	A	L	E	E	W	L	T	S	A	L	T	T	P	F	E	L	E	T	R	L	I	P	D	E	Q	A	I	I	E	Q	T	L	C	E	L	V	D	E	M	S	C	H	L	V	L	T	T	G	G	T	G	P	A	R	R	D
Query Conservation
Alig confidence												.	.	.																							.	.	.																									.
Template Conservation												.	.	.																							.	.	.																									.
Template Sequence		P	L	T	V	G	F	S	Q	V	G	.	.	.	S	E	S	G	W	R	A	A	E	T	N	V	A	K	S	E	A	E	K	R	G	I	.	.	.	T	L	K	I	A	D	G	Q	Q	K	Q	E	N	Q	I	K	A	V	R	S	F	V	A	Q	.	G	V	D	A	I	F	I	A	P	V	V	A	T	G	W	E	P
Template Known Secondary structure												.	.	.			S																		T		.	.	.								T	T																.	T		S							S	S	S	S	S
Template Predicted Secondary structure												.	.	.																							.	.	.																									.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.				.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		83	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	P	D	A	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	K	E	A	K	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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