 |
Job Description | P0AF03 | Confidence | 29.63% | Date | Thu Jan 5 11:24:45 GMT 2012 |
Rank | 157 | Aligned Residues | 64 |
% Identity | 23% | Template | c2j3mA_ |
PDB info |
PDB header:ligase | Chain: A: PDB Molecule:prolyl-trna synthetase; |
PDBTitle: prolyl-trna synthetase from enterococcus faecalis complexed2 with atp, manganese and prolinol
|
Resolution | 2.3 Å |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | N | T | L | R | I | G | L | V | S | I | S | D | R | A | S | S | G | V | Y | Q | D | K | G | I | P | A | L | E | E | W | L | T | S | A | L | T | T | P | F | E | L | E | T | R | L | I | P | D | E | Q | A | I | I | E | Q | T | L | C | E | L | V | D | E | M | S | C | H | L | V | L | T | T | G |
Query Conservation |   |
  |   |   |
|
|   |   |
|
|
|
|
|
|   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |
|   |
|
|
|
|   | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |
|
|   | . | . | . | . | . | . |
|   |   |
|   |   |   |   |   |
|
|
|
|   |   |   |
| . |
|   |   |
|   |
|   |   |
|
|
|
|
Template Sequence |   |
I | A | P | F | D | L | H | V | V | Q | M | N | . |
. |
. |
V | K | D | E | Y | Q | T | K | L | S | Q | E | V | E | A | M | M | T | E | A | G | Y | E | . |
. |
. |
. |
. |
. |
V | L | V | D | D | R | N | E | R | A | G | V | K | F | A | D | A | . |
D | L | I | G | C | P | I | R | I | T | V | G |
Template Known Secondary structure |   |
T | S | S |
| S |  |  |  |  |  | S |
| . | . | . | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| . | . | . | . | . | . |  |  |  |  |
| S | S |
|
|  |  |  |  |  |  |  |  | . |  |  |  | T |
| S |  |  |  |  |  | S |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
| . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . | . | . | . | . | . |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  | . |  |  |
|
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
468 | . | 470 | . | . | . | . | . | . | . | . | . | |
|
|
480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | |
520 | . | . | . | . | . | . | . | . | . | 530 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|