Job Description P0AF03 Confidence 49.02% Date Thu Jan 5 11:24:45 GMT 2012 Rank 95 Aligned Residues 61 % Identity 13% Template c2j37W_ PDB info PDB header:ribosome Chain: W: PDB Molecule:signal recognition particle 54 kda protein PDBTitle: model of mammalian srp bound to 80s rncs Resolution 8.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		N	T	L	R	I	G	L	V	S	I	S	D	R	A	S	S	G	V	Y	Q	D	K	G	I	P	A	L	E	E	W	L	T	S	A	L	T	T	P	F	E	L	E	T	R	L	I	P	.	D	E	Q	A	I	I	E	Q	T	L	C	E	L	V	D	E	M	S	C	H	L	V	L	T
Query Conservation																																																	.
Alig confidence												.	.	.	.	.	.	.	.	.	.																												.
Template Conservation												.	.	.	.	.	.	.	.	.	.
Template Sequence		K	G	W	K	T	C	L	I	C	A	.	.	.	.	.	.	.	.	.	.	D	T	F	R	A	G	A	F	D	Q	L	K	Q	N	A	T	K	A	R	I	P	F	Y	G	S	Y	T	E	M	D	P	V	I	I	A	S	E	G	V	E	K	F	K	N	E	N	F	E	I	I	I	V
Template Known Secondary structure		T	T									.	.	.	.	.	.	.	.	.	.			S	S	S														T										S																T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.											.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions