Job Description P0AF03 Confidence 99.94% Date Thu Jan 5 11:24:45 GMT 2012 Rank 16 Aligned Residues 161 % Identity 12% Template c2fu3A_ PDB info PDB header:biosynthetic protein/structural protein Chain: A: PDB Molecule:gephyrin; PDBTitle: crystal structure of gephyrin e-domain Resolution 2.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.								.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.
Query Sequence		N	T	L	R	I	G	L	V	S	I	S	D	R	A	S	S	.	.	.	.	.	.	.	G	V	Y	Q	D	K	G	I	P	A	L	E	E	W	L	T	S	A	L	T	T	P	F	E	L	E	T	R	L	I	P	D	E	Q	A	I	I	E	Q	T	L	C	E	L	V	D	E	M	S	C	H	L	V	L	T	T	G
Query Conservation																		.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.																						.	.																									.	.
Template Conservation																																														.	.																									.	.
Template Sequence		K	F	P	V	V	A	V	M	S	T	G	N	E	L	L	N	P	E	D	D	L	L	P	G	K	I	R	D	S	N	R	S	T	L	L	A	T	I	Q	E	H	G	Y	P	.	.	T	I	N	L	G	I	V	G	D	N	P	D	D	L	L	N	A	L	N	E	G	I	S	R	.	.	A	D	V	I	I	T	S	G
Template Known Secondary structure													T	T				T	T	S				T	T																	T	T			.	.									S																.	.		S						S
Template Predicted Secondary structure																																														.	.																									.	.
Template SS confidence
		497	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540			.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.			.	.	.	.	.	570	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	G	P	A	R	R	D	V	T	P	D	A	T	L	A	V	A	D	R	E	M	P	G	F	G	E	Q	M	R	Q	I	S	L	H	F	V	P	T	A	I	L	S	R	Q	V	G	V	I	R	K	Q	A	L	I	L	N	L	P	G	Q	P	K	S	I	K	E	T	L	E	G	V	K	D	A	E	G	N	V	V
Query Conservation
Alig confidence																									.	.	.	.	.																	.
Template Conservation																									.	.	.	.	.																	.
Template Sequence		G	V	S	M	G	E	K	D	Y	L	K	Q	V	L	D	I	D	L	H	A	Q	I	H	.	.	.	.	.	F	G	R	V	F	M	K	P	G	L	P	T	T	F	A	T	.	L	D	I	D	G	V	R	K	I	I	F	A	L	P	G	N	P	V	S	A	V	V	T	C	N	L	F	V	V	P	A	L	R	K	M
Template Known Secondary structure				S	S	S	S	T										T	T						.	.	.	.	.		S			S		B	S		T	T						.				T	T										S	S
Template Predicted Secondary structure																									.	.	.	.	.																	.
Template SS confidence
		573	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.						.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.		.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	H	G	I	F	A	S	V	P	Y	C	I	Q	L	L	E	G	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	G	I	L	D	P	R	P	T	I	I	K	A	R	L	S	C	D
Template Known Secondary structure		T	T		S			S									S	S
Template Predicted Secondary structure
Template SS confidence
		647	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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